RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CLEC12BQ2HXU8 276 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 CTU2Q2VPK5 515 aaKnown RBP10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 C20orf204Q6ZNR8 217 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 GALNT10Q86SR1 603 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 CREG2Q8IUH2 290 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 SLC44A2Q8IWA5 706 aaPredicted RBP10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 PLD6Q8N2A8 252 aaKnown RBP10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 PIAS4Q8N2W9 510 aaPredicted RBP10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 AKAP1Q92667 903 aaKnown RBP eCLIP10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 REPS1Q96D71 796 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 CNRIP1Q96F85 164 aaPredicted RBP10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 SERPINI1Q99574 410 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 NPAS1Q99742 590 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 ACBD3Q9H3P7 528 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 C12orf49Q9H741 205 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 PPP4R1LQ9P1A2 415 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 ZNF639Q9UID6 485 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 PROCRQ9UNN8 238 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 DLGAP4Q9Y2H0 992 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 PCDHA9Q9Y5H5 950 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 CADP27708 2225 aa10.51□□□□□ -0.73
NSMCE1-202ENST00000561960 FRG2CA6NGY1 282 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 CLOCKO15516 846 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 KLF4O43474 513 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 PDYNP01213 254 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 C2P06681 752 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 RHOXF2BP0C7M4 288 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 CHN1P15882 459 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 TBXA2RP21731 343 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 ACVR1BP36896 505 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 RNF144AP50876 292 aaPredicted RBP10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 GAS1P54826 345 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 ALDH18A1P54886 795 aaKnown RBP10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 C2orf54Q08AI8 447 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 GALNT1Q10472 559 aaPredicted RBP10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 MAP4K2Q12851 820 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 ZNF155Q12901 538 aaPredicted RBP10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 GRTP1Q5TC63 336 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 FRG2Q64ET8 278 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 LSRQ86X29 649 aaPredicted RBP10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 MEIOBQ8N635 442 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 C1orf52Q8N6N3 182 aaKnown RBP10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 L3MBTL4Q8NA19 623 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 CDC26Q8NHZ8 85 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 HTRA1Q92743 480 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 TM4SF18Q96CE8 201 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 TMCO6Q96DC7 493 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 FRG2BQ96QU4 278 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 UCN2Q96RP3 112 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 SLC39A3Q9BRY0 314 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 VPS11Q9H270 941 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 ZBTB26Q9HCK0 441 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 ACOT9Q9Y305 439 aa10.5□□□□□ -0.73
NSMCE1-202ENST00000561960 HMX2A2RU54 273 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 OR2M5A3KFT3 312 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 GOLGA6L10A6NI86 522 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 SYCE1LA8MT33 242 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 FOXE1O00358 373 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 EIF1AYO14602 144 aaKnown RBP10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 ACOX3O15254 700 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 GPRIN2O60269 458 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 TSPAN2O60636 221 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 ATP1B1P05026 303 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 IL3P08700 152 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 CT45A8P0DMV1 189 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 CT45A9P0DMV2 189 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 CSNK2A2P19784 350 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 CHMP24386 653 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 CRABP2P29373 138 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 KRT20P35900 424 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 PPICP45877 212 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 ZNF844Q08AG5 666 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 IFT88Q13099 833 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 TRAF3Q13114 568 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 SNTA1Q13424 505 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 PRSS53Q2L4Q9 553 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 CT45A2Q5DJT8 189 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 ZNF628Q5EBL2 1059 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 MARCH3Q86UD3 253 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 METTL4Q8N3J2 472 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 C17orf47Q8NEP4 570 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 OR2M3Q8NG83 312 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 OR4F6Q8NGB9 312 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 SLC9A6Q92581 669 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 KLHDC3Q9BQ90 382 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 NTMT1Q9BV86 223 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 EBPLQ9BY08 206 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 TMEM185BQ9H7F4 350 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 GRHL1Q9NZI5 618 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 GDF2Q9UK05 429 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 UTS2RQ9UKP6 389 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 VDAC3Q9Y277 283 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 GPR55Q9Y2T6 319 aaPredicted RBP10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 OR10H1Q9Y4A9 318 aa10.49□□□□□ -0.73
NSMCE1-202ENST00000561960 A0A096LPK6 155 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 C1orf226A1L170 272 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 OR6C70A6NIJ9 312 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 HS3ST1O14792 307 aa10.48□□□□□ -0.73
NSMCE1-202ENST00000561960 RAD51CO43502 376 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms