RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 LRRC75A-AS1Q8N1F1 130 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 MARVELD2Q8N4S9 558 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 TEX26Q8N6G2 289 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 PTGR2Q8N8N7 351 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 C9orf106Q8NAJ2 232 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 OR52K1Q8NGK4 314 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SLC2A12Q8TD20 617 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 BRSK1Q8TDC3 778 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 RND1Q92730 232 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CMTM5Q96DZ9 223 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 ZMYND19Q96E35 227 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 KTI12Q96EK9 354 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 IMP4Q96G21 291 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 NSL1Q96IY1 281 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 THOC3Q96J01 351 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 MAELQ96JY0 434 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 RPRD1AQ96P16 312 aaPredicted RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 IP6K3Q96PC2 410 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 RBBP8Q99708 897 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CCT7Q99832 543 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 TBL1YQ9BQ87 522 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 WDR83Q9BRX9 315 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 BTBD10Q9BSF8 475 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 TRMOQ9BU70 441 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 TM6SF2Q9BZW4 377 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SLC39A8Q9C0K1 460 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 POLR1EQ9GZS1 481 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 RAB6CQ9H0N0 254 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 LRMDAQ9H2I8 198 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 NMRAL1Q9HBL8 299 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 EML4Q9HC35 981 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 SLC40A1Q9NP59 571 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 TRNAU1APQ9NX07 287 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 NDE1Q9NXR1 346 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 ARL15Q9NXU5 204 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 HEY2Q9UBP5 337 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 TMCO1Q9UM00 188 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 SUFUQ9UMX1 484 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 HS3ST2Q9Y278 367 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 DNAJC16Q9Y2G8 782 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 PTRH2Q9Y3E5 179 aaKnown RBP2.98□□□□□ -1.93
SPG11-225ENST00000561391 OR51B4Q9Y5P0 310 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 CCDC88CQ9P219 2028 aa2.98□□□□□ -1.93
SPG11-225ENST00000561391 TRAV17A0A0B4J275 112 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 IGHV5-51A0A0C4DH38 117 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 A0A0G2JND7 137 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ZCWPW2A0A1B0GU75 182 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 LOC285095A0A1B0GVY8 99 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 A0A1W2PQ67 120 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 DYTNA2CJ06 578 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 WDR91A4D1P6 747 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 DPPA5A6NC42 116 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 DNAJC9-AS1A6NH13 148 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 TRPC5OSA6NMA1 111 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 C2orf81A6NN90 581 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 A8MX80 341 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 TOX3O15405 576 aaPredicted RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 GYG2O15488 501 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 KDELR3O43731 214 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PLIN3O60664 434 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 UGDHO60701 494 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PRAMEF11O60813 436 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 BANF1O75531 89 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 KLF7O75840 302 aaPredicted RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 VAPBO95292 243 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 AGR2O95994 175 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 C2P06681 752 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 SERPINA6P08185 405 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ERVK-10P10266 1014 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 MYL2P10916 166 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 NELFEP18615 380 aaKnown RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 GSTM2P28161 218 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PRDX6P30041 224 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ADRA1AP35348 466 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 GRIA1P42261 906 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 MAGEA12P43365 314 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 SOX2P48431 317 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 CD151P48509 253 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 SLC1A6P48664 564 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 CSNK1DP48730 415 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 TNFSF10P50591 281 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 KIAA1024LP59773 190 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 DNAJB13P59910 316 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 RAB10P61026 200 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ABCE1P61221 599 aaKnown RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 ATP6V0D1P61421 351 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PITX1P78337 314 aaPredicted RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 PRAMEP78395 509 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ACY1Q03154 408 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 BST1Q10588 318 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PMPCAQ10713 525 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 FOXF2Q12947 444 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 PRKAA1Q13131 559 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 MFAP5Q13361 173 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 TNK1Q13470 666 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 NCF4Q15080 339 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 ZKSCAN8Q15776 578 aaPredicted RBP2.97□□□□□ -1.93
SPG11-225ENST00000561391 CHI3L2Q15782 390 aa2.97□□□□□ -1.93
SPG11-225ENST00000561391 SRSF7Q16629 238 aaKnown RBP eCLIP2.97□□□□□ -1.93
SPG11-225ENST00000561391 TMEM52BQ4KMG9 183 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms