RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 FBXL2Q9UKC9 423 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 PCTPQ9UKL6 214 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 SLC12A4Q9UP95 1085 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 WIF1Q9Y5W5 379 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ZNF780BQ9Y6R6 833 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 H7C1Q1 480 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 SIAH2O43255 324 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 ZIC3O60481 467 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 TSPAN2O60636 221 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 REM1O75628 298 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 RBP1P09455 135 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 FAM153BP0C7A2 387 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 CT45A8P0DMV1 189 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 CT45A9P0DMV2 189 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 CRYGSP22914 178 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 CD79BP40259 229 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 SERPINB8P50452 374 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 MRPS35P82673 323 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 DUSP2Q05923 314 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 EFR3AQ14156 821 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 FAM153CQ494X1 144 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 CT45A2Q5DJT8 189 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 SGO1Q5FBB7 561 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 ZDHHC24Q6UX98 284 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 P4HA3Q7Z4N8 544 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 MILR1Q7Z6M3 343 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 PRIMA1Q86XR5 153 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 PLD6Q8N2A8 252 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 OR4F6Q8NGB9 312 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 PHF21BQ96EK2 531 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 Q96MF0 132 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 ADOQ96SZ5 270 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 FAIM2Q9BWQ8 316 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 VPS11Q9H270 941 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 NMRK1Q9NWW6 199 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 KLHL28Q9NXS3 571 aa10.7□□□□□ -0.7
CARMIL3-204ENST00000561354 ARID1AO14497 2285 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 NSD1Q96L73 2696 aaPredicted RBP10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 SLC22A20A6NK97 555 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 HMGB1P1B2RPK0 211 aaPredicted RBP10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 SMNDC1O75940 238 aaKnown RBP eCLIP10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 OTCP00480 354 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 PDYNP01213 254 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 PEPDP12955 493 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 PCSK2P16519 638 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 GRK2P25098 689 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 DPP4P27487 766 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 UGT2B10P36537 528 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 HSD17B3P37058 310 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 PNLIPRP2P54317 469 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 GAS1P54826 345 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 EEFSECP57772 596 aaKnown RBP10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 B3GALT5-AS1P59052 145 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 LTB4RQ15722 352 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 ZNF628Q5EBL2 1059 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 ZNF474Q6S9Z5 364 aaPredicted RBP10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 C20orf204Q6ZNR8 217 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 CHMP1BQ7LBR1 199 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 BTLAQ7Z6A9 289 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 YTHDF3Q7Z739 585 aaKnown RBP10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 FAM76AQ8TAV0 307 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 SELENOMQ8WWX9 145 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 MRRFQ96E11 262 aaKnown RBP10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 PIK3IP1Q96FE7 263 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 PGM2Q96G03 612 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 NSUN5Q96P11 429 aaKnown RBP10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 ZIM3Q96PE6 472 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 CCL19Q99731 98 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 SLC39A3Q9BRY0 314 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 MED18Q9BUE0 208 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 TXLNGYQ9BZA5 131 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 FARSBQ9NSD9 589 aaKnown RBP10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 DKKL1Q9UK85 242 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 UTS2RQ9UKP6 389 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 SNX6Q9UNH7 406 aa10.69□□□□□ -0.7
CARMIL3-204ENST00000561354 B4DXG7 233 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 LINC01387J3KSC0 135 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 POLR3GO15318 223 aaPredicted RBP10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 EMC8O43402 210 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 SMIM24O75264 130 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 TNFRSF21O75509 655 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 RPS17P08708 135 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 NUDT17P0C025 328 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 CD8BP10966 210 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 KRT20P35900 424 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 MAGEA12P43365 314 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 KIR2DL2P43627 348 aaPredicted RBP10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 ALDH9A1P49189 494 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 DSCR4P56555 118 aaPredicted RBP10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 CORO7P57737 925 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 MRPS22P82650 360 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 FGFBP1Q14512 234 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 TRADDQ15628 312 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 UAP1Q16222 522 aaPredicted RBP10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 OR5M10Q6IEU7 315 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 FAM180BQ6P0A1 224 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 VWA1Q6PCB0 445 aa10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 LARP4Q71RC2 724 aaKnown RBP eCLIP10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 TRMT10CQ7L0Y3 403 aaKnown RBP10.68□□□□□ -0.7
CARMIL3-204ENST00000561354 CCDC116Q8IYX3 515 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms