RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	PAQR6	Q6TCH4	344 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	KDELC1	Q6UW63	502 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	NUFIP2	Q7Z417	695 aa	Known RBP	4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	PPP1R42	Q7Z4L9	355 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	ADCK1	Q86TW2	530 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	CCDC71	Q8IV32	467 aa	Predicted RBP	4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	TBC1D21	Q8IYX1	336 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	KDM8	Q8N371	416 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235		Q8N377	158 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	LRRC17	Q8N6Y2	441 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	ZNF781	Q8N8C0	355 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	OR1B1	Q8NGR6	318 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	RDH11	Q8TC12	318 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	C17orf50	Q8WW18	174 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	HIST1H2AC	Q93077	130 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	TMEM45B	Q96B21	275 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	RBM18	Q96H35	190 aa	Known RBP	4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	CHCHD5	Q9BSY4	110 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	TUBB1	Q9H4B7	451 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	TRPV5	Q9NQA5	729 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	HOMER3	Q9NSC5	361 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	EIF3K	Q9UBQ5	218 aa	Known RBP	4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	CLIP2	Q9UDT6	1046 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	ENTPD4	Q9Y227	616 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	KLHDC2	Q9Y2U9	406 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	MOB4	Q9Y3A3	225 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	FBXO7	Q9Y3I1	522 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	ATG4B	Q9Y4P1	393 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	AUP1	Q9Y679	476 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	AP1M2	Q9Y6Q5	423 aa		4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	BRCA1	P38398	1863 aa	Known RBP	4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.4	□□□□□ -1.71
TCF12-223	ENST00000561235	ARFGEF1	Q9Y6D6	1849 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	ANKAR	Q7Z5J8	1434 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	USP54	Q70EL1	1684 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	TSPAN2	O60636	221 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	FRAT2	O75474	233 aa	Predicted RBP	4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	IGHG1	P01857	330 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	APRT	P07741	180 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	RPA1	P27694	616 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	PRPH	P41219	470 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	RWDD2B	P57060	319 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	HTD2	P86397	168 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	IFT88	Q13099	833 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	KARS	Q15046	597 aa	Known RBP	4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	SNAI3	Q3KNW1	292 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	ZNF528	Q3MIS6	628 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	WDR25	Q64LD2	544 aa	Predicted RBP	4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	SASS6	Q6UVJ0	657 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	TMEM26	Q6ZUK4	368 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	GPRIN3	Q6ZVF9	776 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	ASRGL1	Q7L266	308 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	YRDC	Q86U90	279 aa	Known RBP	4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	CATSPER3	Q86XQ3	398 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	IQCF2	Q8IXL9	164 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	EFCAB13	Q8IY85	973 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	ABHD12	Q8N2K0	398 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	MRPL43	Q8N983	215 aa	Known RBP	4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	PHYHIP	Q92561	330 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	CAPNS2	Q96L46	248 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	FAM111A	Q96PZ2	611 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	ACCS	Q96QU6	501 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	CBWD1	Q9BRT8	395 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	NLN	Q9BYT8	704 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	OCR1	Q9BZK8	76 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	KRT23	Q9C075	422 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	NT5C3A	Q9H0P0	336 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	HSD3B7	Q9H2F3	369 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	DCTPP1	Q9H773	170 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	TAS2R16	Q9NYV7	291 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	ACTR3B	Q9P1U1	418 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	CTNNA3	Q9UI47	895 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	IKZF3	Q9UKT9	509 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	MGAT4A	Q9UM21	535 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	PLA2G4C	Q9UP65	541 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	PRSS21	Q9Y6M0	314 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	ABCC11	Q96J66	1382 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	SZT2	Q5T011	3432 aa		4.39	□□□□□ -1.71
TCF12-223	ENST00000561235	SNED1	Q8TER0	1413 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	LY75	O60449	1722 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	RPL37AP8	A6NKH3	93 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	PI15	O43692	258 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	ERLIN1	O75477	346 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	PTBP3	O95758	552 aa	Known RBP	4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	CGA	P01215	116 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	HEXB	P07686	556 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	FOSL2	P15408	326 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	CYP11B1	P15538	503 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	CCNA2	P20248	432 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	SLC1A4	P43007	532 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	GSK3B	P49841	420 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	RIDA	P52758	137 aa	Known RBP	4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	RIPK4	P57078	832 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	KRTAP10-6	P60371	365 aa	Predicted RBP	4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	CDKL1	Q00532	357 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	MS4A2	Q01362	244 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	KLHL30	Q0D2K2	578 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms