RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 LIPGQ9Y5X9 500 aa13.98□□□□□ -0.17
SNRPA1-213ENST00000560856 GPR45Q9Y5Y3 372 aa13.98□□□□□ -0.17
SNRPA1-213ENST00000560856 A0A1B0GTH9 108 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 A0A1B0GVC2 190 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 GXYLT2A0PJZ3 443 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 TTC36A6NLP5 189 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 ACOT7O00154 380 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 ABCB7O75027 752 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 ICOSLGO75144 302 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 PDE9AO76083 593 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 SNX4O95219 450 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 ACP2P11117 423 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 IL12AP29459 219 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 GAS1P54826 345 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 RPP38P78345 283 aaKnown RBP13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 RBPJQ06330 500 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 SNTA1Q13424 505 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 OR4F3Q6IEY1 312 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 MFSD12Q6NUT3 480 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 TRILQ7L0X0 811 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 SLC16A11Q8NCK7 471 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 LRRC8CQ8TDW0 803 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 SSC4DQ8WTU2 575 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 CKAP2Q8WWK9 683 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 TESCQ96BS2 214 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 EFHD2Q96C19 240 aaPredicted RBP13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 TMEM41AQ96HV5 264 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 MS4A4EQ96PG1 132 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 OR52B2Q96RD2 323 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 C3orf14Q9HBI5 128 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 GALNT9Q9HCQ5 603 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 EQTNQ9NQ60 294 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 INTS9Q9NV88 658 aaKnown RBP13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 QPCTLQ9NXS2 382 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 CBLCQ9ULV8 474 aa13.97□□□□□ -0.17
SNRPA1-213ENST00000560856 A0A1B0GUH1 482 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 PRAMEF25A6NGN4 478 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 B4DXG7 233 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 CDC40O60508 579 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 IL33O95760 270 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 IGKV1D-16P01601 117 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 CYP4B1P13584 511 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 GABRA3P34903 492 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 PRKAG1P54619 331 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 UFM1P61960 85 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 HBA1P69905 142 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 EFR3AQ14156 821 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 SLC10A1Q14973 349 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 PGS1Q32NB8 556 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 LSM12Q3MHD2 195 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 EMC4Q5J8M3 183 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 TMEM198Q66K66 360 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 TIGD3Q6B0B8 471 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 SLC30A6Q6NXT4 461 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 ZCCHC12Q6PEW1 402 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 EPGNQ6UW88 154 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 FJX1Q86VR8 437 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 DOLPP1Q86YN1 238 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 CLECL1Q8IZS7 167 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 CDRT4Q8N9R6 151 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 FAM110BQ8TC76 370 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 PIK3R3Q92569 461 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 ZNF597Q96LX8 424 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 GNRHR2Q96P88 292 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 METTL7AQ9H8H3 244 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 ACKR4Q9NPB9 350 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 GPATCH2Q9NW75 528 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 FLRT3Q9NZU0 649 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 TINAGQ9UJW2 476 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 OR10H1Q9Y4A9 318 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 USH1CQ9Y6N9 552 aa13.96□□□□□ -0.17
SNRPA1-213ENST00000560856 MED12Q93074 2177 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 TRGV8A0A0C4DH27 118 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 C2orf72A6NCS6 295 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 RNASET2O00584 256 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 SNPHO15079 494 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 FADS1O60427 444 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 HMGN2P05204 90 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 ENDOUP21128 410 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 PTGS2P35354 604 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 KIR3DL1P43629 444 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 CCT3P49368 545 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 MRPS22P82650 360 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 ZNHIT3Q15649 155 aaPredicted RBP13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 DUSP5Q16690 384 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 DECR1Q16698 335 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 SPANXN4Q5MJ08 99 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 ARHGAP11AQ6P4F7 1023 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 PACS2Q86VP3 889 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 WDSUB1Q8N9V3 476 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 FAM57AQ8TBR7 257 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 SFXN5Q8TD22 340 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 TMCO6Q96DC7 493 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 JSRP1Q96MG2 331 aaPredicted RBP13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 OSBPL11Q9BXB4 747 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 Q9N2J8 555 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 ZCCHC3Q9NUD5 404 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 C15orf41Q9Y2V0 281 aa13.95□□□□□ -0.18
SNRPA1-213ENST00000560856 PRSS51A0A1B0GVH4 220 aa13.94□□□□□ -0.18
SNRPA1-213ENST00000560856 C9JVG2 144 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms