RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 C6orf141Q5SZD1 244 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 LAIR2Q6ISS4 152 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 TMPRSS9Q7Z410 1059 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 ARHGAP22Q7Z5H3 698 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 PEX5LQ8IYB4 626 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 TAGAPQ8N103 731 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 ZNF619Q8N2I2 560 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 COX18Q8N8Q8 333 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 OR4D9Q8NGE8 314 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 OR9Q2Q8NGE9 314 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 DOK4Q8TEW6 326 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 HRASLS5Q96KN8 279 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 VSTM2LQ96N03 204 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 APOL4Q9BPW4 351 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 NIPSNAP1Q9BPW8 284 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 FANCEQ9HB96 536 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 FGF21Q9NSA1 209 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 KLHL28Q9NXS3 571 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 ENOPH1Q9UHY7 261 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 TMCC3Q9ULS5 477 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.49
SNX1-211ENST00000560829 GMPPBQ9Y5P6 360 aa12.02□□□□□ -0.49
SNX1-211ENST00000560829 TP53BP1Q12888 1972 aaPredicted RBP12.02□□□□□ -0.49
SNX1-211ENST00000560829 TECTAO75443 2155 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 SCN3AQ9NY46 2000 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 IGKV3D-11A0A0A0MRZ8 115 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 CPED1A4D0V7 1026 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 PATE3B3GLJ2 98 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 ARHGAP33O14559 1287 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 UGT2B17O75795 530 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 ADAP00813 363 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 CYP4B1P13584 511 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 MAOAP21397 527 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 CRHBPP24387 322 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 ELK4P28324 431 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 ALDH3B2P48448 385 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 RPP38P78345 283 aaKnown RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 POU6F2P78424 691 aaPredicted RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 PSG6Q00889 435 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 ZNF155Q12901 538 aaPredicted RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 TOP3AQ13472 1001 aaPredicted RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 PIN1Q13526 163 aaPredicted RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 LARS2Q15031 903 aaKnown RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 CLPPQ16740 277 aaPredicted RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 DCST1Q5T197 706 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 QSOX2Q6ZRP7 698 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 HMGN2P46Q86SG4 172 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 LINC00471Q8N535 108 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 GPR151Q8TDV0 419 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 PIK3R3Q92569 461 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 ZNF566Q969W8 418 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 ZNF556Q9HAH1 456 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 CACYBPQ9HB71 228 aaKnown RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 FOLH1BQ9HBA9 442 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 NECTIN3Q9NQS3 549 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 SLC13A4Q9UKG4 626 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 ZNF232Q9UNY5 417 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 HEMK1Q9Y5R4 338 aaPredicted RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 MAU2Q9Y6X3 613 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 GOLGA4Q13439 2230 aaKnown RBP12.01□□□□□ -0.49
SNX1-211ENST00000560829 LAMA1P25391 3075 aa12.01□□□□□ -0.49
SNX1-211ENST00000560829 CACNA1EQ15878 2313 aa12□□□□□ -0.49
SNX1-211ENST00000560829 A0A1B0GX78 115 aa12□□□□□ -0.49
SNX1-211ENST00000560829 TTC36A6NLP5 189 aa12□□□□□ -0.49
SNX1-211ENST00000560829 BRINP1O60477 761 aa12□□□□□ -0.49
SNX1-211ENST00000560829 PRAMEF2O60811 474 aa12□□□□□ -0.49
SNX1-211ENST00000560829 DBIP07108 87 aaKnown RBP12□□□□□ -0.49
SNX1-211ENST00000560829 EPHA2P29317 976 aa12□□□□□ -0.49
SNX1-211ENST00000560829 GABRA3P34903 492 aa12□□□□□ -0.49
SNX1-211ENST00000560829 OR1D4P47884 311 aa12□□□□□ -0.49
SNX1-211ENST00000560829 CDH15P55291 814 aa12□□□□□ -0.49
SNX1-211ENST00000560829 NUP107P57740 925 aa12□□□□□ -0.49
SNX1-211ENST00000560829 EEF1A1P68104 462 aaKnown RBP12□□□□□ -0.49
SNX1-211ENST00000560829 CCL7P80098 99 aa12□□□□□ -0.49
SNX1-211ENST00000560829 ACY1Q03154 408 aa12□□□□□ -0.49
SNX1-211ENST00000560829 CDK5R2Q13319 367 aa12□□□□□ -0.49
SNX1-211ENST00000560829 SEC23BQ15437 767 aa12□□□□□ -0.49
SNX1-211ENST00000560829 ZNHIT3Q15649 155 aaPredicted RBP12□□□□□ -0.49
SNX1-211ENST00000560829 MEP1AQ16819 746 aa12□□□□□ -0.49
SNX1-211ENST00000560829 PROX2Q3B8N5 592 aa12□□□□□ -0.49
SNX1-211ENST00000560829 NADK2Q4G0N4 442 aa12□□□□□ -0.49
SNX1-211ENST00000560829 EIPR1Q53HC9 387 aa12□□□□□ -0.49
SNX1-211ENST00000560829 TRIM61Q5EBN2 209 aa12□□□□□ -0.49
SNX1-211ENST00000560829 CCNJQ5T5M9 372 aa12□□□□□ -0.49
SNX1-211ENST00000560829 SATL1Q86VE3 508 aa12□□□□□ -0.49
SNX1-211ENST00000560829 CCDC71Q8IV32 467 aaPredicted RBP12□□□□□ -0.49
SNX1-211ENST00000560829 EID2Q8N6I1 236 aa12□□□□□ -0.49
SNX1-211ENST00000560829 AQP11Q8NBQ7 271 aa12□□□□□ -0.49
SNX1-211ENST00000560829 SLC7A13Q8TCU3 470 aa12□□□□□ -0.49
SNX1-211ENST00000560829 LRRN3Q9H3W5 708 aa12□□□□□ -0.49
SNX1-211ENST00000560829 ZNF304Q9HCX3 659 aa12□□□□□ -0.49
SNX1-211ENST00000560829 MAN2C1Q9NTJ4 1040 aa12□□□□□ -0.49
SNX1-211ENST00000560829 DHCR7Q9UBM7 475 aaKnown RBP12□□□□□ -0.49
SNX1-211ENST00000560829 ATXN7L1Q9ULK2 861 aaPredicted RBP12□□□□□ -0.49
SNX1-211ENST00000560829 SRPK3Q9UPE1 567 aa12□□□□□ -0.49
SNX1-211ENST00000560829 MGAT4BQ9UQ53 548 aa12□□□□□ -0.49
SNX1-211ENST00000560829 GPR55Q9Y2T6 319 aaPredicted RBP12□□□□□ -0.49
SNX1-211ENST00000560829 SH3PXD2BA1X283 911 aa12□□□□□ -0.49
SNX1-211ENST00000560829 HRKO00198 91 aa12□□□□□ -0.49
SNX1-211ENST00000560829 TPST2O60704 377 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms