RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 KIF26BQ2KJY2 2108 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ADAMTS20P59510 1910 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 DUXAA6NLW8 204 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 H0YIG0 161 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 M0R129 80 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 OR6B1O95007 311 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 LGI1O95970 557 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 IGFBP1P08833 259 aaPredicted RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 GKN3PP0CG01 181 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ETS2P15036 469 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 TRHRP34981 398 aaPredicted RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 EMDP50402 254 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 SKP1P63208 163 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 PIGFQ07326 219 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ARHGAP40Q5TG30 622 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 C11orf74Q86VG3 221 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 METTL25Q8N6Q8 603 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 CNDP2Q96KP4 475 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 PIGUQ9H490 435 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF304Q9HCX3 659 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 C8orf4Q9NR00 106 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 LANCL2Q9NS86 450 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 OCIAD1Q9NX40 245 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 FBXO4Q9UKT5 387 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 A4GNTQ9UNA3 340 aa10.12□□□□□ -0.79
SNRPA1-211ENST00000560433 C17orf105B2RV13 164 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 H0YAE9 185 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 BCKDKO14874 412 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 ASNA1O43681 348 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 BMP10O95393 424 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 CLPTM1O96005 669 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 LINGO3P0C6S8 592 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 MPLP40238 635 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 RAD23AP54725 363 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 CLDN6P56747 220 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 IL5RAQ01344 420 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 ARHGAP11BQ3KRB8 267 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 PEAR1Q5VY43 1037 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 TMEM236Q5W0B7 351 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 PWWP2BQ6NUJ5 590 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 SLC23A3Q6PIS1 610 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 PRSS42Q7Z5A4 293 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 C8orf59Q8N0T1 100 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 CDRT4Q8N9R6 151 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 AQP11Q8NBQ7 271 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 ZBTB44Q8NCP5 570 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 TSPAN14Q8NG11 270 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 C16orf52Q8NHV5 167 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 SLC7A13Q8TCU3 470 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF675Q8TD23 568 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 GABARAPL1Q9H0R8 117 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 AKIRIN1Q9H9L7 192 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 FOLH1BQ9HBA9 442 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 BATF3Q9NR55 127 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 FTSJ1Q9UET6 329 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 LIPT1Q9Y234 373 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 CACNA1HO95180 2353 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 A0A087WV62 115 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 IGHV3-20A0A0C4DH32 117 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 OR10H3O60404 316 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 IGKV1D-16P01601 117 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 TFAP2AP05549 437 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 ELAVL4P26378 380 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 CD47Q08722 323 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 MAP4K2Q12851 820 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 GNA13Q14344 377 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 INAVAQ3KP66 663 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 COLEC12Q5KU26 742 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 LAIR1Q6GTX8 287 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 FAHD1Q6P587 224 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF836Q6ZNA1 936 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 CCDC71Q8IV32 467 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 RASSF5Q8WWW0 418 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 BTBD2Q9BX70 525 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 OR8D2Q9GZM6 311 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 OR10A5Q9H207 317 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 EPB41L1Q9H4G0 881 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF696Q9H7X3 374 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 CLK4Q9HAZ1 481 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 RXFP3Q9NSD7 469 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 MKL2Q9ULH7 1088 aa10.11□□□□□ -0.79
SNRPA1-211ENST00000560433 DSPPQ9NZW4 1301 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 CDC14CA4D256 554 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 XPNPEP2O43895 674 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 CCNB2O95067 398 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 KCNK2O95069 426 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 SOX14O95416 240 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 CER1O95813 267 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 PRG2P13727 222 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 HOXB6P17509 224 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 FBLP22087 321 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 EEF1B2P24534 225 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 POU1F1P28069 291 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 FMO3P31513 532 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 STT3AP46977 705 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 LIMS1P48059 325 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 RPP38P78345 283 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 NPRL3Q12980 569 aa10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 SMN1Q16637 294 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-211ENST00000560433 TTC23Q5W5X9 447 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms