RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 E2F1Q01094 437 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 DYNC1I2Q13409 638 aaKnown RBP16.62■□□□□ 0.25
SNX1-208ENST00000559844 LTB4RQ15722 352 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 SNAP47Q5SQN1 464 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 AQP11Q8NBQ7 271 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 OTUB1Q96FW1 271 aaPredicted RBP16.62■□□□□ 0.25
SNX1-208ENST00000559844 CSF3RQ99062 836 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 DOK1Q99704 481 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 RHCGQ9UBD6 479 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 MGAT4BQ9UQ53 548 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 MRPS2Q9Y399 296 aaKnown RBP16.62■□□□□ 0.25
SNX1-208ENST00000559844 SYT5O00445 386 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 XPNPEP2O43895 674 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 FAM20BO75063 409 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 FTH1P19P0C7X4 201 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 ITIH1P19827 911 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 CDH3P22223 829 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 VSX2P58304 361 aaPredicted RBP16.62■□□□□ 0.25
SNX1-208ENST00000559844 SLC35A2P78381 396 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 FGD3Q5JSP0 725 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 GPR107Q5VW38 600 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 CDC73Q6P1J9 531 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 TMEM71Q6P5X7 295 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 C16orf62Q7Z3J2 963 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 SLCO6A1Q86UG4 719 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 CCDC71Q8IV32 467 aaPredicted RBP16.62■□□□□ 0.25
SNX1-208ENST00000559844 P3H2Q8IVL5 708 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 ENTHD1Q8IYW4 607 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 OR2L13Q8N349 312 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 C19orf47Q8N9M1 422 aaKnown RBP16.62■□□□□ 0.25
SNX1-208ENST00000559844 OR7G2Q8NG99 324 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 NR4A3Q92570 626 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 COL26A1Q96A83 441 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 MAP3K3Q99759 626 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 CCDC90BQ9GZT6 254 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 EQTNQ9NQ60 294 aa16.62■□□□□ 0.25
SNX1-208ENST00000559844 PAK1IP1Q9NWT1 392 aaPredicted RBP16.62■□□□□ 0.25
SNX1-208ENST00000559844 TLCD2A6NGC4 264 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 LGI1O95970 557 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 ALPPP05187 535 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 IFI6P09912 130 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 OLR1P78380 273 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 HPCAP84074 193 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 CLPPQ16740 277 aaPredicted RBP16.61■□□□□ 0.25
SNX1-208ENST00000559844 FAM214AQ32MH5 1076 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 ZNF770Q6IQ21 691 aaPredicted RBP16.61■□□□□ 0.25
SNX1-208ENST00000559844 MFSD12Q6NUT3 480 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 DHRS13Q6UX07 377 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 ZNF574Q6ZN55 896 aaPredicted RBP16.61■□□□□ 0.25
SNX1-208ENST00000559844 SVOPQ8N4V2 548 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 LINC00471Q8N535 108 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 OR4D9Q8NGE8 314 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 OR4D11Q8NGI4 311 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 FAM81AQ8TBF8 368 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 SGCDQ92629 289 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 TANKQ92844 425 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 MUL1Q969V5 352 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 C12orf43Q96C57 262 aaKnown RBP16.61■□□□□ 0.25
SNX1-208ENST00000559844 CD180Q99467 661 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 DPYSL5Q9BPU6 564 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 RSPO3Q9BXY4 272 aaPredicted RBP16.61■□□□□ 0.25
SNX1-208ENST00000559844 RNF6Q9Y252 685 aa16.61■□□□□ 0.25
SNX1-208ENST00000559844 DSPPQ9NZW4 1301 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 ZNF860A6NHJ4 632 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 A8MU76 341 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 UGT2B17O75795 530 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 ST6GAL1P15907 406 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 ELAVL4P26378 380 aaKnown RBP16.6■□□□□ 0.25
SNX1-208ENST00000559844 TMBIM6P55061 237 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 NPTX1Q15818 432 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 HEPHL1Q6MZM0 1159 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 CA13Q8N1Q1 262 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 ZNF540Q8NDQ6 660 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 LHPPQ9H008 270 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 SLC24A3Q9HC58 644 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 RASSF1Q9NS23 344 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 SLC13A4Q9UKG4 626 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 CDC14AQ9UNH5 594 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 KCNE3Q9Y6H6 103 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 TRBV4-1A0A0J9YWV2 114 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 RGS10O43665 173 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 DNAJB6O75190 326 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 GASTP01350 101 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 SDHBP21912 280 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 MAPK10P53779 464 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 RAB38P57729 211 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 INSM1Q01101 510 aaPredicted RBP16.6■□□□□ 0.25
SNX1-208ENST00000559844 MVKQ03426 396 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 KIF26BQ2KJY2 2108 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 ZNF628Q5EBL2 1059 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 MLIPQ5VWP3 458 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 GTF2IRD2BQ6EKJ0 949 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 NIPAL1Q6NVV3 410 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 FAM111BQ6SJ93 734 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 GTF2IRD2Q86UP8 949 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 LACC1Q8IV20 430 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 OR4N5Q8IXE1 308 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 GTPBP3Q969Y2 492 aaKnown RBP16.6■□□□□ 0.25
SNX1-208ENST00000559844 FNDC11Q9BVV2 318 aa16.6■□□□□ 0.25
SNX1-208ENST00000559844 SLC38A1Q9H2H9 487 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms