RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PRICKLE4Q2TBC4 344 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 IQCCQ4KMZ1 466 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 ZNF628Q5EBL2 1059 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 SWT1Q5T5J6 900 aaKnown RBP15.37■□□□□ 0.05
TPM1-219ENST00000559397 VTCN1Q7Z7D3 282 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 PATL1Q86TB9 770 aaKnown RBP15.37■□□□□ 0.05
TPM1-219ENST00000559397 ZDHHC21Q8IVQ6 265 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 GALNT4Q8N4A0 578 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 PTPMT1Q8WUK0 201 aaPredicted RBP15.37■□□□□ 0.05
TPM1-219ENST00000559397 RAB8BQ92930 207 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 GIMAP5Q96F15 307 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 DOHHQ9BU89 302 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 CXorf21Q9HAI6 301 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 PTGFRNQ9P2B2 879 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 APC2O95996 2303 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 CFAP47Q6ZTR5 3102 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 IGHV1-45A0A0A0MS14 117 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 PRAMEF27A3QJZ7 478 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 C7orf72A4D263 438 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 A8MUA0 341 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 M0QX08 132 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 SLITRK5O94991 958 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 RASAL1O95294 804 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 CST1P01037 141 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 IFNA14P01570 189 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 HMGN2P05204 90 aaKnown RBP15.36■□□□□ 0.05
TPM1-219ENST00000559397 OR12D1P0DN82 309 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 COX6A1P12074 109 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 MAN2A2P49641 1150 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 CLCN2P51788 898 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 KCNJ10P78508 379 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 UNQ6494/PRO21346Q6UXR6 183 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 LGI4Q8N135 537 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 OR2L13Q8N349 312 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 CBR4Q8N4T8 237 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 NUP43Q8NFH3 380 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 OR7G2Q8NG99 324 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 OR11G2Q8NGC1 345 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 ZNF675Q8TD23 568 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 DOK4Q8TEW6 326 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 KAT2AQ92830 837 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 RIT1Q92963 219 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 CTHRC1Q96CG8 243 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 TMEM19Q96HH6 336 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 MAGED4Q96JG8 741 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 C7orf34Q96L11 122 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 ZNF700Q9H0M5 742 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 MAT2BQ9NZL9 334 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 RAB26Q9ULW5 256 aa15.36■□□□□ 0.05
TPM1-219ENST00000559397 A0A087WV62 115 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 C17orf105B2RV13 164 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 PDLIM1O00151 329 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 PGM3O95394 542 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 TNNI3P19429 210 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 PRKAG1P54619 331 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 MAP4K2Q12851 820 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 LASP1Q14847 261 aaKnown RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 NRF1Q16656 503 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 FHL5Q5TD97 284 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 SZRD1Q7Z422 152 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 MRGPREQ86SM8 312 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 RAB43Q86YS6 212 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 AMER2Q8N7J2 671 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 NFAM1Q8NET5 270 aaPredicted RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 OR14A16Q8NHC5 309 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 TMBIM1Q969X1 311 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 VPS50Q96JG6 964 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 CCNL2Q96S94 520 aaPredicted RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 P2RX2Q9UBL9 471 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 SAGE2PA6NJ88 616 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 HRKO00198 91 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 DENRO43583 198 aaKnown RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 ASNA1O43681 348 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 PLOD3O60568 738 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 DPM1O60762 260 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 SEC24DO94855 1032 aaPredicted RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 DDAH2O95865 285 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 BCHEP06276 602 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 RPSAP08865 295 aaKnown RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 S1PR1P21453 382 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 MRPS35P82673 323 aaKnown RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 VLDLRP98155 873 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 CRTC2Q53ET0 693 aaPredicted RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 PAPD4Q6PIY7 484 aaKnown RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 FAM111BQ6SJ93 734 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 SPACA3Q8IXA5 215 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 GALNT12Q8IXK2 581 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 OR5D16Q8NGK9 328 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 DAZLQ92904 295 aaKnown RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 C16orf58Q96GQ5 468 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 TPD52L3Q96J77 140 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 IMMP1LQ96LU5 166 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 LPAR4Q99677 370 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 BCL2L10Q9HD36 194 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 PPIEQ9UNP9 301 aaKnown RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 C19orf53Q9UNZ5 99 aaPredicted RBP15.35■□□□□ 0.05
TPM1-219ENST00000559397 CLCA3PQ9Y6N3 262 aa15.35■□□□□ 0.05
TPM1-219ENST00000559397 C5orf58C9J3I9 102 aa15.34■□□□□ 0.05
TPM1-219ENST00000559397 TAF4O00268 1085 aa15.34■□□□□ 0.05
TPM1-219ENST00000559397 DLGAP1O14490 977 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms