RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 METTL11BQ5VVY1 283 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 TOM1L2Q6ZVM7 507 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 CCDC91Q7Z6B0 441 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 AMZ2Q86W34 360 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 IQCA1Q86XH1 822 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 SLC25A38Q96DW6 304 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 CCDC51Q96ER9 411 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 NAP1L3Q99457 506 aaPredicted RBP2.43□□□□□ -2.02
VPS13C-207ENST00000558919 CBWD1Q9BRT8 395 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 TM2D1Q9BX74 207 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 TSSK1BQ9BXA7 367 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 PRMT8Q9NR22 394 aaPredicted RBP2.43□□□□□ -2.02
VPS13C-207ENST00000558919 HOMER3Q9NSC5 361 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 ELOVL2Q9NXB9 296 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 FAM153AQ9UHL3 310 aa2.43□□□□□ -2.02
VPS13C-207ENST00000558919 ZMYM6O95789 1325 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 USP6P35125 1406 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 A0A0U1RQG5 324 aaPredicted RBP2.42□□□□□ -2.02
VPS13C-207ENST00000558919 PINLYPA6NC86 204 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 PANO1I0J062 215 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 OR7A17O14581 309 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 EMC8O43402 210 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 LATO43561 262 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 PROS1P07225 676 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 CCDC166P0CW27 439 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 NR2C1P13056 603 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 MDKP21741 143 aaPredicted RBP2.42□□□□□ -2.02
VPS13C-207ENST00000558919 MAGEA4P43358 317 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 RPL32P62910 135 aaKnown RBP2.42□□□□□ -2.02
VPS13C-207ENST00000558919 ARF5P84085 180 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 GALK2Q01415 458 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 RAB35Q15286 201 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 KHDRBS2Q5VWX1 349 aaKnown RBP2.42□□□□□ -2.02
VPS13C-207ENST00000558919 UFSP1Q6NVU6 142 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 GPBP1Q86WP2 473 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 PEX5LQ8IYB4 626 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 SFRP1Q8N474 314 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 LEMD2Q8NC56 503 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 ZNF397Q8NF99 534 aaPredicted RBP2.42□□□□□ -2.02
VPS13C-207ENST00000558919 NDUFAF3Q9BU61 184 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 HES7Q9BYE0 225 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 Q9H3A6 140 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 MEPEQ9NQ76 525 aaPredicted RBP2.42□□□□□ -2.02
VPS13C-207ENST00000558919 FAM114A2Q9NRY5 505 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 DCAF13Q9NV06 445 aaKnown RBP2.42□□□□□ -2.02
VPS13C-207ENST00000558919 EHFQ9NZC4 300 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 HMG20BQ9P0W2 317 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 FKBP7Q9Y680 259 aa2.42□□□□□ -2.02
VPS13C-207ENST00000558919 DHX29Q7Z478 1369 aaKnown RBP2.41□□□□□ -2.02
VPS13C-207ENST00000558919 TRBV2A0A0J9YWF9 115 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 ZNF861PO60384 105 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 PGK1P00558 417 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 NF2P35240 595 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 OR3A4PP47883 348 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 SLC6A8P48029 635 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 HNRNPFP52597 415 aaKnown RBP2.41□□□□□ -2.02
VPS13C-207ENST00000558919 UCNP55089 124 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 C17orf67Q0P5P2 114 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 PSG7Q13046 419 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 BTG3Q14201 252 aaPredicted RBP2.41□□□□□ -2.02
VPS13C-207ENST00000558919 PKN2Q16513 984 aaKnown RBP2.41□□□□□ -2.02
VPS13C-207ENST00000558919 ZSWIM7Q19AV6 140 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 PARP6Q2NL67 630 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 CCDC14Q49A88 953 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 SPATA46Q5T0L3 261 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 LEG1Q6P5S2 330 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 GOLGA7Q7Z5G4 137 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 PARGQ86W56 976 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 TGIF2LYQ8IUE0 185 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 CENPSQ8N2Z9 138 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 RNF175Q8N4F7 328 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 ADAMTS16Q8TE57 1224 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 C18orf25Q96B23 403 aaPredicted RBP2.41□□□□□ -2.02
VPS13C-207ENST00000558919 DTD2Q96FN9 168 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 ZNF560Q96MR9 790 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 CARD6Q9BX69 1037 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 TEX13AQ9BXU3 409 aaPredicted RBP2.41□□□□□ -2.02
VPS13C-207ENST00000558919 GLT8D2Q9H1C3 349 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 CARD9Q9H257 536 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 TRIM10Q9UDY6 481 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 FZR1Q9UM11 496 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 CDC42BPBQ9Y5S2 1711 aa2.41□□□□□ -2.02
VPS13C-207ENST00000558919 KINO60870 393 aaKnown RBP2.4□□□□□ -2.03
VPS13C-207ENST00000558919 HSF2BPO75031 334 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 GNSP15586 552 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 RFC2P35250 354 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 NUMBP49757 651 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 CASP9P55211 416 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 RPS6P62753 249 aaKnown RBP2.4□□□□□ -2.03
VPS13C-207ENST00000558919 HERVK_113P63132 956 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 ERVK-8P63133 956 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 IL17AQ16552 155 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 CYP51A1Q16850 503 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 C2orf76Q3KRA6 126 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 CYBRD1Q53TN4 286 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 WSCD1Q658N2 575 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 ZNF57Q68EA5 555 aaPredicted RBP2.4□□□□□ -2.03
VPS13C-207ENST00000558919 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
VPS13C-207ENST00000558919 TRPM8Q7Z2W7 1104 aa2.4□□□□□ -2.03
VPS13C-207ENST00000558919 ERI1Q8IV48 349 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms