RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 MAPK11Q15759 364 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 SYPL1Q16563 259 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 DCST2Q5T1A1 773 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 IRAK1BP1Q5VVH5 260 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 KRT73Q86Y46 540 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 C9orf40Q8IXQ3 194 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 ZNF321PQ8N8H1 164 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 ZNF441Q8N8Z8 693 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 BHLHE22Q8NFJ8 381 aaPredicted RBP13.79□□□□□ -0.2
VPS18-202ENST00000558474 ADAMTS17Q8TE56 1095 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 DOK4Q8TEW6 326 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 CDS1Q92903 461 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 FAM162AQ96A26 154 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 DUS3LQ96G46 650 aaKnown RBP13.79□□□□□ -0.2
VPS18-202ENST00000558474 SCNM1Q9BWG6 230 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 ZNF350Q9GZX5 532 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 MTHFD2LQ9H903 347 aaPredicted RBP13.79□□□□□ -0.2
VPS18-202ENST00000558474 DCAF13Q9NV06 445 aaKnown RBP13.79□□□□□ -0.2
VPS18-202ENST00000558474 CBLCQ9ULV8 474 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 DSPPQ9NZW4 1301 aa13.79□□□□□ -0.2
VPS18-202ENST00000558474 CNOT1A5YKK6 2376 aaKnown RBP13.79□□□□□ -0.2
VPS18-202ENST00000558474 TCRBV3S1A0A5B6 114 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 PRAMEF27A3QJZ7 478 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 FKBP6O75344 327 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 GPIP06744 558 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 ATP6V1B2P21281 511 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 OTX2P32243 289 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 ID4P47928 161 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 FUT5Q11128 374 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 CCNIQ14094 377 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.78□□□□□ -0.2
VPS18-202ENST00000558474 BTBD16Q32M84 506 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 GPAT3Q53EU6 434 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 ZFP1Q6P2D0 407 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 AAGABQ6PD74 315 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 NPSR1Q6W5P4 371 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 CBLL1Q75N03 491 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 MRGPREQ86SM8 312 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 SPPL2CQ8IUH8 684 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 SLC44A2Q8IWA5 706 aaPredicted RBP13.78□□□□□ -0.2
VPS18-202ENST00000558474 ARMC10Q8N2F6 343 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 SLC15A4Q8N697 577 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 FGF11Q92914 225 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 SDF2Q99470 211 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 TREX2Q9BQ50 279 aaPredicted RBP13.78□□□□□ -0.2
VPS18-202ENST00000558474 UGT2B28Q9BY64 529 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 TRIM45Q9H8W5 580 aaPredicted RBP13.78□□□□□ -0.2
VPS18-202ENST00000558474 ADPRHL2Q9NX46 363 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 DKK4Q9UBT3 224 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 ZNF223Q9UK11 482 aaPredicted RBP13.78□□□□□ -0.2
VPS18-202ENST00000558474 DTX4Q9Y2E6 619 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 OR10H1Q9Y4A9 318 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 GPC6Q9Y625 555 aaPredicted RBP13.78□□□□□ -0.2
VPS18-202ENST00000558474 KCNE3Q9Y6H6 103 aa13.78□□□□□ -0.2
VPS18-202ENST00000558474 TRBV11-1A0A0K0K1C0 115 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 TCRBV5S2A0A599 114 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 CDK2AP1O14519 115 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 KCNK2O95069 426 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 H6PDO95479 791 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 CHRM4P08173 479 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 LIFP15018 202 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 NCK1P16333 377 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 NAGAP17050 411 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 NRG3P56975 720 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 MRPS22P82650 360 aaKnown RBP13.77□□□□□ -0.21
VPS18-202ENST00000558474 RIPK1Q13546 671 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 IL10RAQ13651 578 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 DECR1Q16698 335 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 ZSWIM7Q19AV6 140 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 FAM69BQ5VUD6 431 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 JMJD6Q6NYC1 403 aaPredicted RBP13.77□□□□□ -0.21
VPS18-202ENST00000558474 CYP2R1Q6VVX0 501 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 EIF3MQ7L2H7 374 aaKnown RBP13.77□□□□□ -0.21
VPS18-202ENST00000558474 SPATA24Q86W54 205 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 KBTBD2Q8IY47 623 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 TAGAPQ8N103 731 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 ANKFN1Q8N957 763 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 ZSCAN1Q8NBB4 408 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 FBXO30Q8TB52 745 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 THAP4Q8WY91 577 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 LZICQ8WZA0 190 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 FER1L6-AS2Q96M78 137 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 DEFB126Q9BYW3 111 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 DPH1Q9BZG8 443 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 HOXD1Q9GZZ0 328 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 SLC38A1Q9H2H9 487 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 EVA1AQ9H8M9 152 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 CACYBPQ9HB71 228 aaKnown RBP13.77□□□□□ -0.21
VPS18-202ENST00000558474 P4HTMQ9NXG6 502 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 ANGPTL2Q9UKU9 493 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 IFT52Q9Y366 437 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 WDR45Q9Y484 360 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 PCDHGA10Q9Y5H3 936 aa13.77□□□□□ -0.21
VPS18-202ENST00000558474 M0QX08 132 aa13.76□□□□□ -0.21
VPS18-202ENST00000558474 GCM2O75603 506 aaPredicted RBP13.76□□□□□ -0.21
VPS18-202ENST00000558474 IL33O95760 270 aa13.76□□□□□ -0.21
VPS18-202ENST00000558474 SERPINA1P01009 418 aa13.76□□□□□ -0.21
VPS18-202ENST00000558474 SERPINA7P05543 415 aa13.76□□□□□ -0.21
VPS18-202ENST00000558474 ATP6V1C1P21283 382 aa13.76□□□□□ -0.21
VPS18-202ENST00000558474 PSMA4P25789 261 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms