RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 SNRPB2P08579 225 aaKnown RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 HOXD4P09016 255 aaPredicted RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 BCKDHAP12694 445 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 COX6B1P14854 86 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ELAVL4P26378 380 aaKnown RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 CHRNB4P30926 498 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 NTSP30990 170 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 SERPINB5P36952 375 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ADH7P40394 386 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 PNLIPRP2P54317 469 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 RPL38P63173 70 aaKnown RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 PSG6Q00889 435 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 TFF3Q07654 80 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 CRYZQ08257 329 aaKnown RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 PDE7AQ13946 482 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 KRT71Q3SY84 523 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 EIPR1Q53HC9 387 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 TNFAIP8L3Q5GJ75 292 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 SH2D4BQ5SQS7 431 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 C1orf185Q5T7R7 199 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ANKRD26P1Q6NSI1 321 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 TMEM107Q6UX40 140 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ANGPTL8Q6UXH0 198 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 B3GNT6Q6ZMB0 384 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ZNF551Q7Z340 670 aaPredicted RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 SLC44A2Q8IWA5 706 aaPredicted RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 HOMEZQ8IX15 550 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 MCEMP1Q8IX19 187 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ULK2Q8IYT8 1036 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ZNF295-AS1Q8N0V1 137 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 OR2L13Q8N349 312 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 LIX1Q8N485 282 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 WDSUB1Q8N9V3 476 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 OR1J4Q8NGS1 313 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 TWIST2Q8WVJ9 160 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 CIDECQ96AQ7 238 aaPredicted RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ZNF764Q96H86 408 aaPredicted RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 C3orf30Q96M34 536 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 TSSK3Q96PN8 268 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ADOQ96SZ5 270 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 TIMP4Q99727 224 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 CCT7Q99832 543 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 OSBPL11Q9BXB4 747 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 UCK2Q9BZX2 261 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ENKD1Q9H0I2 346 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 REEP4Q9H6H4 257 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 EML4Q9HC35 981 aaKnown RBP8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 ALKBH4Q9NXW9 302 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 TAS2R9Q9NYW1 312 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 SENP1Q9P0U3 644 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 GIMAP2Q9UG22 337 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 SLC6A5Q9Y345 797 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 TMED5Q9Y3A6 229 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 PCDHGB3Q9Y5G1 929 aa8.01□□□□□ -1.13
SNRPA1-206ENST00000558059 CSMD2Q7Z408 3487 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 C15orf38-AP3S2A0A0A6YYH1 394 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 A0A0G2JNJ9 132 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 B4DXG7 233 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 RGS16O15492 202 aaPredicted RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 CTIFO43310 598 aaKnown RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 COQ9O75208 318 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 TOXO94900 526 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 IFI6P09912 130 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 CYP4B1P13584 511 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 GABRA1P14867 456 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 IGFBP2P18065 325 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 BMP7P18075 431 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 PTGER4P35408 488 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 FRKP42685 505 aaPredicted RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 SERPINB4P48594 390 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 GAS1P54826 345 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 PSPHP78330 225 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 ZNF155Q12901 538 aaPredicted RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 GAB1Q13480 694 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 EFR3AQ14156 821 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 GALNTL6Q49A17 601 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 XKR7Q5GH72 579 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 NHSL2Q5HYW2 709 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 WIPI1Q5MNZ9 446 aaPredicted RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 DCST1Q5T197 706 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 VASNQ6EMK4 673 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 SEM1Q6ZVN7 128 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 LARP4Q71RC2 724 aaKnown RBP eCLIP8□□□□□ -1.13
SNRPA1-206ENST00000558059 WDR53Q7Z5U6 358 aaPredicted RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 YRDCQ86U90 279 aaKnown RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 EXOC3L1Q86VI1 746 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 LIX1LQ8IVB5 337 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 DDIASQ8IXT1 998 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 FAM83FQ8NEG4 500 aaPredicted RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 OR10Q1Q8NGQ4 319 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 CLHC1Q8NHS4 586 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 AGR3Q8TD06 166 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 HOXB13Q92826 284 aaPredicted RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 EFHD2Q96C19 240 aaPredicted RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 TMCO6Q96DC7 493 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 PKNOX2Q96KN3 472 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 SPOCK3Q9BQ16 436 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 TREX2Q9BQ50 279 aaPredicted RBP8□□□□□ -1.13
SNRPA1-206ENST00000558059 UGT2B28Q9BY64 529 aa8□□□□□ -1.13
SNRPA1-206ENST00000558059 TRIM8Q9BZR9 551 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms