RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 SMPDL3AQ92484 453 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 POP5Q969H6 163 aaKnown RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 TM4SF18Q96CE8 201 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 VWCEQ96DN2 955 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 GSTK1Q9Y2Q3 226 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 LEUTXA8MZ59 168 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 E9PI62 339 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 PGRMC2O15173 223 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 PIPP12273 146 aaPredicted RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 PTX3P26022 381 aaPredicted RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 TRHRP34981 398 aaPredicted RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 SLC1A3P43003 542 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 NCBP2P52298 156 aaKnown RBP eCLIP11.59□□□□□ -0.55
LDLR-205ENST00000557933 HCCSP53701 268 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 PDE7AQ13946 482 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 HYAL4Q2M3T9 481 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 PRSS45Q7RTY3 260 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 ZNF547Q8IVP9 402 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 TRIM63Q969Q1 353 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 SPATA9Q9BWV2 254 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 ENKD1Q9H0I2 346 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 MYNNQ9NPC7 610 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 TESQ9UGI8 421 aaKnown RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 CHST2Q9Y4C5 530 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 F5P12259 2224 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 TP53BP1Q12888 1972 aaPredicted RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 KIAA0100Q14667 2235 aaKnown RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 SLC16A5O15375 505 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 LCMT2O60294 686 aaKnown RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 FCMRO60667 390 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 HMGN2P05204 90 aaKnown RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 CLUP10909 449 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 PTHLHP12272 177 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 VIPR1P32241 457 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 GAS1P54826 345 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 RPS7P62081 194 aaKnown RBP11.59□□□□□ -0.55
LDLR-205ENST00000557933 RPA4Q13156 261 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 QSOX2Q6ZRP7 698 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 CYB561A3Q8NBI2 242 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 OR51L1Q8NGJ5 315 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 OR9A1PQ8NGU1 263 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 CEP76Q8TAP6 659 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 HCAR1Q9BXC0 346 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 OSGEPL1Q9H4B0 414 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 KLHL31Q9H511 634 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 ZSCAN32Q9NX65 697 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 SLC23A2Q9UGH3 650 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 STOML2Q9UJZ1 356 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 FBXL4Q9UKA2 621 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 IRAK3Q9Y616 596 aa11.59□□□□□ -0.55
LDLR-205ENST00000557933 PI15O43692 258 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 SOD1P00441 154 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 PNLIPRP1P54315 467 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 DCDC1P59894 354 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 MAB21L1Q13394 359 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 MEDAGQ5VYS4 303 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 PLBD1Q6P4A8 553 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 LIPIQ6XZB0 460 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 PARS2Q7L3T8 475 aaKnown RBP11.58□□□□□ -0.56
LDLR-205ENST00000557933 CPOQ8IVL8 374 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 NRMQ8IXM6 262 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 GPR135Q8IZ08 494 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 OR11H7Q8NGC8 314 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 OR4Q3Q8NH05 313 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 OR8K5Q8NH50 307 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 ZNF431Q8TF32 576 aaPredicted RBP11.58□□□□□ -0.56
LDLR-205ENST00000557933 C2orf15Q8WU43 125 aaKnown RBP11.58□□□□□ -0.56
LDLR-205ENST00000557933 TMEM43Q9BTV4 400 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 OR51V1Q9H2C8 321 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 ENAMQ9NRM1 1142 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 SEMA4GQ9NTN9 838 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 HS3ST2Q9Y278 367 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 KIAA1671Q9BY89 1806 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 POM121CA8CG34 1229 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 DDCP20711 480 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 PRKACBP22694 351 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 KELP23276 732 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 HSD3B2P26439 372 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 IRS1P35568 1242 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 MAGEB1P43366 347 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 GPR1P46091 355 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 EVX1P49640 407 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 SNRPNP63162 240 aaKnown RBP11.58□□□□□ -0.56
LDLR-205ENST00000557933 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.58□□□□□ -0.56
LDLR-205ENST00000557933 LTB4RQ15722 352 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 SLC25A35Q3KQZ1 300 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 KLHL22Q53GT1 634 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 MZT2BQ6NZ67 158 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 SLC27A4Q6P1M0 643 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 CLDN22Q8N7P3 220 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 PLA2G15Q8NCC3 412 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 OR4D9Q8NGE8 314 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 TMEM255BQ8WV15 326 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 C12orf66Q96MD2 445 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 ABHD1Q96SE0 405 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 EFCAB11Q9BUY7 163 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 MCOLN1Q9GZU1 580 aa11.58□□□□□ -0.56
LDLR-205ENST00000557933 GLIPR2Q9H4G4 154 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms