RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 UBLCP1Q8WVY7 318 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 HAS2Q92819 552 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TNFRSF14Q92956 283 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 MARC2Q969Z3 335 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CAPNS2Q96L46 248 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RUNDC3BQ96NL0 473 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 S1PR3Q99500 378 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 IL12RB2Q99665 862 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PSD2Q9BQI7 771 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 POLR1EQ9GZS1 481 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 OR51B5Q9H339 312 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 FGF22Q9HCT0 170 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 C12orf4Q9NQ89 552 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF275Q9NSD4 429 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PLCXD1Q9NUJ7 323 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 FAIMQ9NVQ4 179 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 HYPKQ9NX55 129 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 DCDC2Q9UHG0 476 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 GMEB2Q9UKD1 530 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SAMHD1Q9Y3Z3 626 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PRSS21Q9Y6M0 314 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CLCA3PQ9Y6N3 262 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 POLR3AO14802 1390 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ADCY9O60503 1353 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 MAGI1Q96QZ7 1491 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ABCA5Q8WWZ7 1642 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 A0A0U1RQS6 177 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PVALEFA0A1B0GWK0 134 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PRR23AA6NEV1 266 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 EPM2AB3EWF7 344 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 OGTO15294 1046 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RAD51BO15315 384 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 NOL3O60936 208 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SURF6O75683 361 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 MFN2O95140 757 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 APOEP02649 317 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CLTAP09496 248 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TFPTP0C1Z6 253 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PSMB6P28072 239 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ALDH3A1P30838 453 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CHRNB4P30926 498 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 NUDT1P36639 197 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CAMLGP49069 296 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CDH11P55287 796 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM50BP56557 158 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 NUP107P57740 925 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 HAND2P61296 217 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ERVK-16P61578 105 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF177Q13360 481 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 EIF4EBP2Q13542 120 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 FASTKD3Q14CZ7 662 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 DUSP5Q16690 384 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ACTBL2Q562R1 376 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ARMCX4Q5H9R4 360 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM31Q5JXX7 168 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 FAM46CQ5VWP2 391 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 WSCD1Q658N2 575 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SPOPLQ6IQ16 392 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 GID4Q8IVV7 300 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 IQCKQ8N0W5 287 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ELMOD1Q8N336 334 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 OR13C2Q8NGS9 318 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 OR52N1Q8NH53 320 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RMND5BQ96G75 393 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 FAM218AQ96MZ4 157 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PCDHB18PQ96TA0 734 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 BPIFA3Q9BQP9 254 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 FSD1Q9BTV5 496 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PAPOLGQ9BWT3 736 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ANGPTL4Q9BY76 406 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 MRPL13Q9BYD1 178 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 KRT23Q9C075 422 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 UPF3AQ9H1J1 476 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SMPD3Q9NY59 655 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 STX18Q9P2W9 335 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TRPC4Q9UBN4 977 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TRMT6Q9UJA5 497 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SLC22A14Q9Y267 594 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 MRPS18CQ9Y3D5 142 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ATP10AO60312 1499 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 FANCD2Q9BXW9 1451 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 NEDD4P46934 1319 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 STK36Q9NRP7 1315 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 CEP162Q5TB80 1403 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 IGHV4-30-2A0A087WSY4 118 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GOLGA8QA0A0J9YX86 632 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GOLGA8OA6NCC3 632 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 EFCAB10A6NFE3 127 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GOLGA8NF8WBI6 632 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ARHGEF9O43307 516 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 TNFSF12O43508 249 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ECI2O75521 394 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 IGHEP01854 428 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SERPINA6P08185 405 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ATF6P18850 670 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 HMOX2P30519 316 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms