RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 HDHD5Q9BXW7 423 aa15.28■□□□□ 0.04
SHMT2-231ENST00000557433 ATP13A2Q9NQ11 1180 aa15.28■□□□□ 0.04
SHMT2-231ENST00000557433 TEX10Q9NXF1 929 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-231ENST00000557433 H2AFY2Q9P0M6 372 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-231ENST00000557433 EXTL2Q9UBQ6 330 aa15.28■□□□□ 0.04
SHMT2-231ENST00000557433 MALT1Q9UDY8 824 aa15.28■□□□□ 0.04
SHMT2-231ENST00000557433 TEKT2Q9UIF3 430 aa15.28■□□□□ 0.04
SHMT2-231ENST00000557433 RNF215Q9Y6U7 377 aa15.28■□□□□ 0.04
SHMT2-231ENST00000557433 C7orf66A4D0T2 115 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 SMIM30A4D0T7 59 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 C12orf71A8MTZ7 269 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 GJA1P17302 382 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 F8A1P23610 371 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 PPM1AP35813 382 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 CAP1Q01518 475 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 NFE2L1Q14494 772 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 PGGHGQ32M88 737 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 PLA1AQ53H76 456 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 EOGTQ5NDL2 527 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 CDC73Q6P1J9 531 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 SZRD1Q7Z422 152 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 CDH24Q86UP0 819 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 TPRA1Q86W33 373 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 C9orf62Q8N4C0 152 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 OR5K2Q8NHB8 316 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 CYB5D2Q8WUJ1 264 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 TFGQ92734 400 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-231ENST00000557433 UCN3Q969E3 161 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 GPR137Q96N19 417 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 BBS4Q96RK4 519 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 DHRS9Q9BPW9 319 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 PRR14Q9BWN1 585 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 HDHD2Q9H0R4 259 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 KCNK12Q9HB15 430 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 KLHL28Q9NXS3 571 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 TNFRSF10DQ9UBN6 386 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 CCL26Q9Y258 94 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 GPR52Q9Y2T5 361 aa15.27■□□□□ 0.04
SHMT2-231ENST00000557433 LOC102723532A0A0G2JNH3 316 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 TEX51A0A1B0GUA7 166 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 GTPBP1O00178 669 aaKnown RBP15.27■□□□□ 0.03
SHMT2-231ENST00000557433 ICMTO60725 284 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 APOL3O95236 402 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 LALBAP00709 142 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 C8AP07357 584 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 PEPDP12955 493 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 SOX18P35713 384 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 NCBP2P52298 156 aaKnown RBP eCLIP15.27■□□□□ 0.03
SHMT2-231ENST00000557433 GPR176Q14439 515 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 NDUFAF5Q5TEU4 345 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 SDE2Q6IQ49 451 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 RAB42Q8N4Z0 105 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 LMNTD1Q8N9Z9 388 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 OR5AR1Q8NGP9 310 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 SPRYD4Q8WW59 207 aaPredicted RBP15.27■□□□□ 0.03
SHMT2-231ENST00000557433 CITED4Q96RK1 184 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 WACQ9BTA9 647 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 DPH7Q9BTV6 452 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 MED28Q9H204 178 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 INPP5EQ9NRR6 644 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 C5AR2Q9P296 337 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 COPZ2Q9P299 210 aa15.27■□□□□ 0.03
SHMT2-231ENST00000557433 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.27■□□□□ 0.03
SHMT2-231ENST00000557433 A0A1W2PQ72 361 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 GSAPA4D1B5 854 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 LINC00862A6NCI5 91 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 RNF13O43567 381 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 ELK1P19419 428 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 PRKAR1BP31321 381 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 ACSL1P33121 698 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 ST8SIA6P61647 398 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 PRR5P85299 388 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 CSTF1Q05048 431 aaKnown RBP15.26■□□□□ 0.03
SHMT2-231ENST00000557433 FUT5Q11128 374 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 ARHGAP15Q53QZ3 475 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 ZNF311Q5JNZ3 666 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 LY6G5CQ5SRR4 150 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 ZBTB37Q5TC79 503 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 CNKSR3Q6P9H4 555 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 LILRA6Q6PI73 481 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 TMEM91Q6ZNR0 172 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 RFPL4BQ6ZWI9 263 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 UBE3DQ7Z6J8 389 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 C11orf96Q7Z7L8 435 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 GLCCI1Q86VQ1 547 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 ZFP41Q8N8Y5 198 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 OR4M1Q8NGD0 313 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 SECISBP2Q96T21 854 aaKnown RBP15.26■□□□□ 0.03
SHMT2-231ENST00000557433 ACAT2Q9BWD1 397 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 FN3KQ9H479 309 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 GALNT9Q9HCQ5 603 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 TDP1Q9NUW8 608 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 NLGN3Q9NZ94 848 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 PTGFRNQ9P2B2 879 aa15.26■□□□□ 0.03
SHMT2-231ENST00000557433 DNMT3AQ9Y6K1 912 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-231ENST00000557433 KPNA3O00505 521 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-231ENST00000557433 MAN2B1O00754 1011 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 KLF4O43474 513 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 AKR7A2O43488 359 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 NPR2P20594 1047 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms