RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 DPP4P27487 766 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 LOXP28300 417 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-210ENST00000557431 CD79BP40259 229 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 ETF1P62495 437 aaKnown RBP12.72□□□□□ -0.37
SLIRP-210ENST00000557431 SNTA1Q13424 505 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 CT45A2Q5DJT8 189 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 ZNF628Q5EBL2 1059 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 SH2D4BQ5SQS7 431 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 LRRN4CLQ8ND94 238 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 OR4K17Q8NGC6 315 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 ZNF845Q96IR2 970 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-210ENST00000557431 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 RTN4RQ9BZR6 473 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 DSN1Q9H410 356 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 FOLH1BQ9HBA9 442 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 RYDENQ9NUL5 291 aaKnown RBP12.72□□□□□ -0.37
SLIRP-210ENST00000557431 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
SLIRP-210ENST00000557431 UTP11Q9Y3A2 253 aaKnown RBP12.72□□□□□ -0.37
SLIRP-210ENST00000557431 SONP18583 2426 aaKnown RBP12.71□□□□□ -0.37
SLIRP-210ENST00000557431 YLPM1P49750 1951 aaKnown RBP12.71□□□□□ -0.37
SLIRP-210ENST00000557431 OR6C70A6NIJ9 312 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 SLC22A20A6NK97 555 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 MSTNO14793 375 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 TO15178 435 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 RPS17P08708 135 aaKnown RBP12.71□□□□□ -0.37
SLIRP-210ENST00000557431 POU2F1P14859 743 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 DRD5P21918 477 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 CRYGSP22914 178 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 IL12BP29460 328 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 KIR2DL2P43627 348 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-210ENST00000557431 KCNJ5P48544 419 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 HTR6P50406 440 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 GAS1P54826 345 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 NR1H2P55055 460 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 GAB1Q13480 694 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 ACKR1Q16570 336 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 PRSS53Q2L4Q9 553 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 RAET1LQ5VY80 246 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 AAGABQ6PD74 315 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 LARP4Q71RC2 724 aaKnown RBP eCLIP12.71□□□□□ -0.372e-8■■□□□ 12.5
SLIRP-210ENST00000557431 ZNF610Q8N9Z0 462 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 TMCO6Q96DC7 493 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 SLC35A4Q96G79 324 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 PINK1Q9BXM7 581 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 EBPLQ9BY08 206 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 ACBD3Q9H3P7 528 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 NINJ2Q9NZG7 142 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 MED11Q9P086 117 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 PRODH2Q9UF12 536 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 DLGAP4Q9Y2H0 992 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 ZNF780BQ9Y6R6 833 aa12.71□□□□□ -0.37
SLIRP-210ENST00000557431 ABCA1O95477 2261 aa12.71□□□□□ -0.38
SLIRP-210ENST00000557431 CADP27708 2225 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 ZANQ9Y493 2812 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 H3BML4 177 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 STX16-NPEPL1H3BU86 382 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 STX16O14662 325 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 SMIM24O75264 130 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 PLAUP00749 431 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 SBK3P0C264 359 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 HK1P19367 917 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 CASQ1P31415 396 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 MC3RP41968 323 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 CLDN20P56880 219 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 RAE1P78406 368 aaKnown RBP12.7□□□□□ -0.38
SLIRP-210ENST00000557431 EXOC3L2Q2M3D2 409 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 GGTA1PQ4G0N0 100 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 PPP4R4Q6NUP7 873 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 SYT10Q6XYQ8 523 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 SLC44A2Q8IWA5 706 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-210ENST00000557431 LRRC75A-AS1Q8N1F1 130 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 OR7G2Q8NG99 324 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 UHMK1Q8TAS1 419 aaKnown RBP12.7□□□□□ -0.38
SLIRP-210ENST00000557431 FNDC9Q8TBE3 224 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 TRPC4APQ8TEL6 797 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 ZNF483Q8TF39 744 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-210ENST00000557431 PIGTQ969N2 578 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 MARK4Q96L34 752 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 VSTM2LQ96N03 204 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 BTBD9Q96Q07 612 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 KLHL4Q9C0H6 718 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 PPP4R1LQ9P1A2 415 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 TRPS1Q9UHF7 1281 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 CLEC4AQ9UMR7 237 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 ZNF337Q9Y3M9 751 aa12.7□□□□□ -0.38
SLIRP-210ENST00000557431 A8MT66 165 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 GUCY1B2O75343 617 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 CHMP24386 653 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 KRT20P35900 424 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 UGT2B10P36537 528 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 MAGEA12P43365 314 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 RFX3P48380 749 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 BTKQ06187 659 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 ZNF155Q12901 538 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-210ENST00000557431 TEX35Q5T0J7 233 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 SCIMPQ6UWF3 145 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 CHMP1BQ7LBR1 199 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 CDYL2Q8N8U2 506 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 MAPK1IP1LQ8NDC0 245 aa12.69□□□□□ -0.38
SLIRP-210ENST00000557431 OR2M3Q8NG83 312 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms