RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 PEPDP12955 493 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 CRABP2P29373 138 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 SPRP35270 261 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 GAS1P54826 345 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 ALDH18A1P54886 795 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 IRF9Q00978 393 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 FGFBP1Q14512 234 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 PON3Q15166 354 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 CT45A2Q5DJT8 189 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 SGO1Q5FBB7 561 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 SWT1Q5T5J6 900 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 RAET1LQ5VY80 246 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 FRG2Q64ET8 278 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 PODNL1Q6PEZ8 512 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 C3orf62Q6ZUJ4 267 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 COMMD6Q7Z4G1 85 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 CENPLQ8N0S6 344 aaPredicted RBP8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 PPM1NQ8N819 430 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF611Q8N823 705 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 OR4K17Q8NGC6 315 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 OR52B6Q8NGF0 335 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 OR5M1Q8NGP8 315 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 RHEBL1Q8TAI7 183 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 TMEM158Q8WZ71 300 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 KLHL29Q96CT2 875 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 SLC35A4Q96G79 324 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 PLPPR2Q96GM1 343 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 FRG2BQ96QU4 278 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 LRRC1Q9BTT6 524 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 NOL11Q9H8H0 719 aaKnown RBP8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 ANKRA2Q9H9E1 313 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 SAYSD1Q9NPB0 183 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 AHSPQ9NZD4 102 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 ADAM29Q9UKF5 820 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 ACOT9Q9Y305 439 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF337Q9Y3M9 751 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 CR1P17927 2039 aa8.12□□□□□ -1.11
HNRNPC-227ENST00000556897 H3BML4 177 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 OR7A17O14581 309 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 SCO2O43819 266 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 TSPAN2O60636 221 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 TMCC2O75069 709 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 GUCY1B2O75343 617 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 AQP8O94778 261 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 TP53P04637 393 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 C8BP07358 591 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 PPP3CBP16298 524 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 TCP1P17987 556 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 HK1P19367 917 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 IL12BP29460 328 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 KRT20P35900 424 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 ALDH9A1P49189 494 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 DSCR4P56555 118 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 CLDN20P56880 219 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 EEFSECP57772 596 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 RPS4XP62701 263 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 MRPS25P82663 173 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 EFR3AQ14156 821 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 GUSBP1Q15486 140 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 GRTP1Q5TC63 336 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 TTC19Q6DKK2 380 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 STAC2Q6ZMT1 411 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 CYS1Q717R9 158 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 LARP4Q71RC2 724 aaKnown RBP eCLIP8.11□□□□□ -1.113e-11■■□□□ 11.8
HNRNPC-227ENST00000556897 FAM214BQ7L5A3 538 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 PAGE2Q7Z2X7 111 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 HIPK1Q86Z02 1210 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 WFDC8Q8IUA0 241 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 METTL4Q8N3J2 472 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 GBP7Q8N8V2 638 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 OR2M3Q8NG83 312 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 TRPC4APQ8TEL6 797 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 RNF138Q8WVD3 245 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 AKAP1Q92667 903 aaKnown RBP eCLIP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 ATP6V1E2Q96A05 226 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 EFHD2Q96C19 240 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 CNRIP1Q96F85 164 aaPredicted RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF681Q96N22 645 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 BTBD9Q96Q07 612 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 TMEM204Q9BSN7 226 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 REG4Q9BYZ8 158 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 DSN1Q9H410 356 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 YAE1D1Q9NRH1 226 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 PPP4R1LQ9P1A2 415 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF175Q9Y473 711 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 TNPO3Q9Y5L0 923 aaKnown RBP8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 ALPK2Q86TB3 2170 aa8.11□□□□□ -1.11
HNRNPC-227ENST00000556897 CADP27708 2225 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 UQCRHLA0A096LP55 91 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 TLX2O43763 284 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 CD5LO43866 347 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 C2P06681 752 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 EVI2BP34910 448 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 GALNT1Q10472 559 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 STX5Q13190 355 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 SGCBQ16585 318 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 FAM83EQ2M2I3 478 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF628Q5EBL2 1059 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 ALKBH2Q6NS38 261 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 PPP4R4Q6NUP7 873 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms