RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ASIC5Q9NY37 505 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 MARCOQ9UEW3 520 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-207ENST00000556831 ATP6V1HQ9UI12 483 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 HAO1Q9UJM8 370 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 TINAGQ9UJW2 476 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 SNX8Q9Y5X2 465 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 CACNA1DQ01668 2161 aa12.93□□□□□ -0.34
SLIRP-207ENST00000556831 BCKDKO14874 412 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 HDAC3O15379 428 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 EMC8O43402 210 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 TRAPPC6AO75865 159 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 SOAT1P35610 550 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 CASP3P42574 277 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 RFX3P48380 749 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 PRIM2P49643 509 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 CLK3P49761 638 aaKnown RBP12.92□□□□□ -0.34
SLIRP-207ENST00000556831 SMSP52788 366 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 C3AR1Q16581 482 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 PRSS53Q2L4Q9 553 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 HYAL4Q2M3T9 481 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 CYP27C1Q4G0S4 372 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 ZNF385BQ569K4 471 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 NXNQ6DKJ4 435 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 BHLHB9Q6PI77 547 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 RPTNQ6XPR3 784 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 OTOGQ6ZRI0 2925 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 CD163Q86VB7 1156 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 CDRT4Q8N9R6 151 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 VPS37AQ8NEZ2 397 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 NUP43Q8NFH3 380 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 OR7A2PQ8NGA2 310 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 OR1J4Q8NGS1 313 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 FAM57AQ8TBR7 257 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 GPR151Q8TDV0 419 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 SLC9A6Q92581 669 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 ARL8AQ96BM9 186 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 SARAFQ96BY9 339 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 ANGPTL4Q9BY76 406 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 BHLHE41Q9C0J9 482 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-207ENST00000556831 C20orf27Q9GZN8 174 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 MEAF6Q9HAF1 191 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 ZCCHC3Q9NUD5 404 aaKnown RBP12.92□□□□□ -0.34
SLIRP-207ENST00000556831 PLEKHB1Q9UF11 243 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-207ENST00000556831 CBLCQ9ULV8 474 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 PCDHGB4Q9UN71 923 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 F8P00451 2351 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 DNHD1Q96M86 4753 aa12.92□□□□□ -0.34
SLIRP-207ENST00000556831 TRGV5A0A0B4J1U4 118 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 A1L4Q6 167 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 OR14I1A6ND48 311 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 FIGNL2A6NMB9 653 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 HCN1O60741 890 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 UGT2B11O75310 529 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 SNNO75324 88 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-207ENST00000556831 NME6O75414 186 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-207ENST00000556831 KRT16P08779 473 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 CT45A8P0DMV1 189 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 CT45A9P0DMV2 189 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 EFNA1P20827 205 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-207ENST00000556831 CDK9P50750 372 aaKnown RBP12.91□□□□□ -0.34
SLIRP-207ENST00000556831 CLNS1AP54105 237 aaKnown RBP12.91□□□□□ -0.34
SLIRP-207ENST00000556831 PNLIPRP2P54317 469 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 FOXO1Q12778 655 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 MLC1Q15049 377 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 CT45A2Q5DJT8 189 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 BICRALQ6AI39 1079 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 ANGPTL8Q6UXH0 198 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 NPSR1Q6W5P4 371 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 Q6ZPB1 254 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-207ENST00000556831 KRTCAP2Q8N6L1 136 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 OR56A1Q8NGH5 318 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 OR5P2Q8WZ92 322 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 MOAP1Q96BY2 351 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 EFHD2Q96C19 240 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-207ENST00000556831 SLC35A4Q96G79 324 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 TMEM41AQ96HV5 264 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 DUSP26Q9BV47 211 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 FAM107BQ9H098 131 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 TP63Q9H3D4 680 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-207ENST00000556831 ACAD8Q9UKU7 415 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 ZNF835Q9Y2P0 537 aa12.91□□□□□ -0.34
SLIRP-207ENST00000556831 EXPH5Q8NEV8 1989 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 C15orf38-AP3S2A0A0A6YYH1 394 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 LRRC3CA6NJW4 275 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 NPIPA2E9PIF3 369 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 NPIPA3F8WFD2 350 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 AQP7O14520 342 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 GNB5O14775 395 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 SUSD5O60279 629 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 ZG16O60844 167 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 TRIM3O75382 744 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-207ENST00000556831 ALOX5P09917 674 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 LAMP1P11279 417 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 GABRA3P34903 492 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 FRKP42685 505 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-207ENST00000556831 CLDN8P56748 225 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 PSG6Q00889 435 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 TP53BP2Q13625 1128 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 DPY19L1Q2PZI1 675 aa12.9□□□□□ -0.34
SLIRP-207ENST00000556831 WLSQ5T9L3 541 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms