RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CCNYL2Q5T2Q4 361 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 RAPH1Q70E73 1250 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 STK32CQ86UX6 486 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 NEUROG1Q92886 237 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 KLHL29Q96CT2 875 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 SERPINI1Q99574 410 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 SHARPINQ9H0F6 387 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 DDX47Q9H0S4 455 aaKnown RBP12.49□□□□□ -0.41
ACTN1-219ENST00000556432 LPAR3Q9UBY5 353 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 GDF2Q9UK05 429 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-219ENST00000556432 TSC22D4Q9Y3Q8 395 aa12.49□□□□□ -0.41
ACTN1-219ENST00000556432 H0YIV9 168 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 UBFD1O14562 309 aaKnown RBP12.48□□□□□ -0.41
ACTN1-219ENST00000556432 TO15178 435 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 SSX4O60224 188 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 KERAO60938 352 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 ATP1B1P05026 303 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 EIF1AXP47813 144 aaKnown RBP12.48□□□□□ -0.41
ACTN1-219ENST00000556432 CASP9P55211 416 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 CORO7P57737 925 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 RAB10P61026 200 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 MRPS35P82673 323 aaKnown RBP12.48□□□□□ -0.41
ACTN1-219ENST00000556432 ZNF844Q08AG5 666 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 TMEM249Q2WGJ8 235 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 TRMT12Q53H54 448 aaKnown RBP12.48□□□□□ -0.41
ACTN1-219ENST00000556432 PAGE2Q7Z2X7 111 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 TBC1D1Q86TI0 1168 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-219ENST00000556432 ZNF619Q8N2I2 560 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 CDKL2Q92772 493 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 EFHD2Q96C19 240 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-219ENST00000556432 SLC35A4Q96G79 324 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 MCMBPQ9BTE3 642 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 ESRP2Q9H6T0 727 aaKnown RBP12.48□□□□□ -0.41
ACTN1-219ENST00000556432 PTGES2Q9H7Z7 377 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 FOLH1BQ9HBA9 442 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 LRTM1Q9HBL6 345 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 NMRAL1Q9HBL8 299 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 PLSCR4Q9NRQ2 329 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 MED11Q9P086 117 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 GPR55Q9Y2T6 319 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-219ENST00000556432 RNF11Q9Y3C5 154 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 OR10H1Q9Y4A9 318 aa12.48□□□□□ -0.41
ACTN1-219ENST00000556432 IGHV4-30-2A0A087WSY4 118 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 FAM234BA2RU67 622 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 OR2M5A3KFT3 312 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 B4DXG7 233 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 LINC01387J3KSC0 135 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 FOXE1O00358 373 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-219ENST00000556432 EIF1AYO14602 144 aaKnown RBP12.47□□□□□ -0.41
ACTN1-219ENST00000556432 WIPF1O43516 503 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 DLX3O60479 287 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 GUCY1B2O75343 617 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 NME6O75414 186 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-219ENST00000556432 SEMA3DO95025 777 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 FESP07332 822 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 DANCRP0C864 163 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 GFAPP14136 432 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 SLC6A8P48029 635 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 ALDH9A1P49189 494 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 EMDP50402 254 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 NUDT6P53370 316 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 MRPS22P82650 360 aaKnown RBP12.47□□□□□ -0.41
ACTN1-219ENST00000556432 RUNX1T1Q06455 604 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 GANABQ14697 944 aaKnown RBP12.47□□□□□ -0.41
ACTN1-219ENST00000556432 ERCC6LQ2NKX8 1250 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 TTC19Q6DKK2 380 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-219ENST00000556432 ADAM5Q6NVV9 412 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 FAM180BQ6P0A1 224 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 SLC48A1Q6P1K1 146 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 ZNF662Q6ZS27 426 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 BEND4Q6ZU67 534 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 METTL25Q8N6Q8 603 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 OR2M3Q8NG83 312 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 LILRB1Q8NHL6 650 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-219ENST00000556432 S100PBPQ96BU1 408 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-219ENST00000556432 UBXN10Q96LJ8 280 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 BTBD9Q96Q07 612 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 GPR22Q99680 433 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 MRPL1Q9BYD6 325 aaKnown RBP12.47□□□□□ -0.41
ACTN1-219ENST00000556432 C12orf49Q9H741 205 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 NGBQ9NPG2 151 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 AHSPQ9NZD4 102 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 ZNF639Q9UID6 485 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 PSME2Q9UL46 239 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 GPR52Q9Y2T5 361 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 JRKLQ9Y4A0 524 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 PCDHA9Q9Y5H5 950 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 ZNF780BQ9Y6R6 833 aa12.47□□□□□ -0.41
ACTN1-219ENST00000556432 C1orf226A1L170 272 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 SYCE1LA8MT33 242 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 GMFGO60234 142 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 TSPAN2O60636 221 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 UGDHO60701 494 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 SRD5A1P18405 259 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 IL32P24001 234 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 IVDP26440 423 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 CDC25BP30305 580 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 EVI2BP34910 448 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms