RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 UBL7Q96S82 380 aaPredicted RBP13.17□□□□□ -0.3
CHD8-208ENST00000555301 SH3GL1Q99961 368 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 BTBD2Q9BX70 525 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHD8-208ENST00000555301 SLC25A18Q9H1K4 315 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 SERHL2Q9H4I8 314 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 IL1RL2Q9HB29 575 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 ANKRD10Q9NXR5 420 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 TAGLN3Q9UI15 199 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 OR6C70A6NIJ9 312 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 TP53I11O14683 189 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 AIM2O14862 343 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 REM1O75628 298 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 UNC5CO95185 931 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 F10P00742 488 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 OR12D1P0DN82 309 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 IL12BP29460 328 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 CRATP43155 626 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 TNFSF10P50591 281 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 MVDP53602 400 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 PNLIPRP2P54317 469 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 CASP9P55211 416 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 RPP38P78345 283 aaKnown RBP13.16□□□□□ -0.3
CHD8-208ENST00000555301 ART3Q13508 389 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 EFR3AQ14156 821 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 RGNQ15493 299 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHD8-208ENST00000555301 ZNF468Q5VIY5 522 aaPredicted RBP13.16□□□□□ -0.3
CHD8-208ENST00000555301 HACD2Q6Y1H2 254 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 RTL4Q6ZR62 310 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 TRPM8Q7Z2W7 1104 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 NUP54Q7Z3B4 507 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 PRR22Q8IZ63 422 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 BCORP1Q8N888 145 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 XAGE5Q8WWM1 108 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 DIO2Q92813 273 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 CDS1Q92903 461 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 TMEM125Q96AQ2 219 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 OTUB1Q96FW1 271 aaPredicted RBP13.16□□□□□ -0.3
CHD8-208ENST00000555301 RMND5BQ96G75 393 aaPredicted RBP13.16□□□□□ -0.3
CHD8-208ENST00000555301 COL21A1Q96P44 957 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 SECISBP2Q96T21 854 aaKnown RBP13.16□□□□□ -0.3
CHD8-208ENST00000555301 G6PC3Q9BUM1 346 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 THUMPD3Q9BV44 507 aaKnown RBP13.16□□□□□ -0.3
CHD8-208ENST00000555301 TIMMDC1Q9NPL8 285 aa13.16□□□□□ -0.3
CHD8-208ENST00000555301 ZNF71Q9NQZ8 489 aaPredicted RBP13.16□□□□□ -0.3
CHD8-208ENST00000555301 MAP1BP46821 2468 aaKnown RBP13.15□□□□□ -0.3
CHD8-208ENST00000555301 C15orf38-AP3S2A0A0A6YYH1 394 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 TRAV17A0A0B4J275 112 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 GXYLT2A0PJZ3 443 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 K7EM74 188 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 FXYD1O00168 92 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 HMGN4O00479 90 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 HS6ST1O60243 411 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 TSPAN2O60636 221 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 SLC25A12O75746 678 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 NEURL1O76050 574 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 KCNK2O95069 426 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 IL33O95760 270 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 C1QCP02747 245 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 ESRRAP11474 423 aaPredicted RBP13.15□□□□□ -0.3
CHD8-208ENST00000555301 CD46P15529 392 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 GPX2P18283 190 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 LCN1P31025 176 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 NUDT2P50583 147 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 CAPRIN1Q14444 709 aaKnown RBP13.15□□□□□ -0.3
CHD8-208ENST00000555301 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHD8-208ENST00000555301 COX20Q5RI15 118 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 DCST2Q5T1A1 773 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 SPINK14Q6IE38 97 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 C16orf62Q7Z3J2 963 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 ARPINQ7Z6K5 226 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 LSM14AQ8ND56 463 aaKnown RBP13.15□□□□□ -0.3
CHD8-208ENST00000555301 MDS2Q8NDY4 140 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 FAM13CQ8NE31 585 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 CHDHQ8NE62 594 aaPredicted RBP13.15□□□□□ -0.3
CHD8-208ENST00000555301 OR8J3Q8NGG0 315 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 FAM110BQ8TC76 370 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 TMCO6Q96DC7 493 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 C5orf34Q96MH7 638 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 SIGLEC12Q96PQ1 595 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 ADOQ96SZ5 270 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.3
CHD8-208ENST00000555301 CPPED1Q9BRF8 314 aaPredicted RBP13.15□□□□□ -0.3
CHD8-208ENST00000555301 ARL8BQ9NVJ2 186 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 LIPT1Q9Y234 373 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 PCDHGB6Q9Y5F9 930 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 ZZEF1O43149 2961 aa13.15□□□□□ -0.3
CHD8-208ENST00000555301 PKD1L2Q7Z442 2459 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 TMEM247A6NEH6 219 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 UGT2B11O75310 529 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 BMP2P12643 396 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 ETFAP13804 333 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 ATP6V1C1P21283 382 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 CALB2P22676 271 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 RFX3P48380 749 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 ST13P50502 369 aaKnown RBP13.14□□□□□ -0.31
CHD8-208ENST00000555301 FBXW4P57775 412 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 MTPNP58546 118 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 DSTNP60981 165 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms