RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 TMEM107Q6UX40 140 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 GDF7Q7Z4P5 450 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 RDH10Q8IZV5 341 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 CLIP4Q8N3C7 705 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 OR6F1Q8NGZ6 308 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 ZFPM2Q8WW38 1151 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 LRR1Q96L50 414 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 UBL7Q96S82 380 aaPredicted RBP11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 LYRM4Q9HD34 91 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 PTGFRNQ9P2B2 879 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 CRNNQ9UBG3 495 aaPredicted RBP11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 SNX7Q9UNH6 387 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 SLC9A8Q9Y2E8 581 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 SLC22A7Q9Y694 548 aa11.78□□□□□ -0.52
PPP4R3A-206ENST00000554943 TP53BP1Q12888 1972 aaPredicted RBP11.77□□□□□ -0.52
PPP4R3A-206ENST00000554943 SHISA3A0PJX4 238 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 A8MU76 341 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 PLD2O14939 933 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 P2RX6O15547 441 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 TBX1O43435 398 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 GUCY1B2O75343 617 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 GTF2E2P29084 291 aaKnown RBP11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 NTSP30990 170 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 CD79BP40259 229 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 SSR2P43308 183 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 TSTA3Q13630 321 aaPredicted RBP11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 MED22Q15528 200 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 BAK1Q16611 211 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 ZNF362Q5T0B9 420 aaPredicted RBP11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 ATAD3BQ5T9A4 648 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 USP30Q70CQ3 517 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 SRFBP1Q8NEF9 429 aaKnown RBP11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 NUP43Q8NFH3 380 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 OR9A2Q8NGT5 310 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 OR52N1Q8NH53 320 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 RPS4Y2Q8TD47 263 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 GANCQ8TET4 914 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 ACOT11Q8WXI4 607 aaPredicted RBP11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 MS4A4EQ96PG1 132 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 DCLRE1CQ96SD1 692 aaKnown RBP11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 EVA1AQ9H8M9 152 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 ZDHHC4Q9NPG8 344 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 SACM1LQ9NTJ5 587 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 CALML5Q9NZT1 146 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 ZNF443Q9Y2A4 671 aaPredicted RBP11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 EXOSC1Q9Y3B2 195 aaKnown RBP11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 PNMA8CA0A1B0GUJ8 204 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 TBC1D3BA6NDS4 549 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 OR52A4PA6NMU1 304 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 WWP2O00308 870 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 CYR61O00622 381 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 CKMT1AP12532 417 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 MC3RP41968 323 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 HTR3AP46098 478 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 RORCP51449 518 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 CTBP2P56545 445 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 TRAM2Q15035 370 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.77□□□□□ -0.531e-7■■□□□ 11.9
PPP4R3A-206ENST00000554943 WDR88Q6ZMY6 472 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 ZNF836Q6ZNA1 936 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 VRK2Q86Y07 508 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 COQ7Q99807 217 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 KATNB1Q9BVA0 655 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 GRIP1Q9Y3R0 1128 aa11.77□□□□□ -0.53
PPP4R3A-206ENST00000554943 TBC1D3KA0A087X1G2 549 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 TBC1D3FA6NER0 549 aaPredicted RBP11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 CCDC182A6NF36 153 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 ERI3O43414 337 aaKnown RBP11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 DNAJB6O75190 326 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 CSNK2A2P19784 350 aaPredicted RBP11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 HTR2AP28223 471 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 HTR1FP30939 366 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 TP53BP2Q13625 1128 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 RUNX2Q13950 521 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 NXNL2Q5VZ03 156 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 TBC1D3GQ6DHY5 549 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 ZNF730Q6ZMV8 503 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 LIX1LQ8IVB5 337 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 RAB42Q8N4Z0 105 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 VANGL1Q8TAA9 524 aaPredicted RBP11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 GPR151Q8TDV0 419 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 DNAJA4Q8WW22 397 aaPredicted RBP11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 FGF14Q92915 247 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 BMFQ96LC9 184 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 SCML1Q9UN30 329 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 C19orf53Q9UNZ5 99 aaPredicted RBP11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 CENPVL1A0A0U1RR11 272 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 LINC00854A0A1B0GVQ3 168 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 GSAPA4D1B5 854 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 CDC42EP2O14613 210 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 TNFRSF10CO14798 259 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 FCMRO60667 390 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 PAK4O96013 591 aaPredicted RBP11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 ALPPP05187 535 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 CA3P07451 260 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 SOX6P35712 828 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 ANXA11P50995 505 aaKnown RBP11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 PPP2CBP62714 309 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 PPP2CAP67775 309 aa11.76□□□□□ -0.53
PPP4R3A-206ENST00000554943 FABP5Q01469 135 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms