RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 OR56B4Q8NH76 319 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 RPLP0P6Q8NHW5 317 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 ALG14Q96F25 216 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DMRTA2Q96SC8 542 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 PDCD10Q9BUL8 212 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 TPT1P8Q9HAU6 139 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 MARK1Q9P0L2 795 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SEC14L3Q9UDX4 400 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 FZD4Q9ULV1 537 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SLC22A14Q9Y267 594 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 TMEM82A0PJX8 343 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 PMS2P1A4D2B8 440 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 ZNF593O00488 134 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SIGLEC5O15389 551 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 GCM2O75603 506 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 GADD45GO95257 159 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 ZNF806P0C7X5 589 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 HMGA1P17096 107 aaKnown RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 AOAHP28039 575 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 RBMS1P29558 406 aaKnown RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SPAM1P38567 509 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 PREPP48147 710 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 BCL2L1Q07817 233 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SIGLEC14Q08ET2 396 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 HEPACAMQ14CZ8 416 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 ZSWIM7Q19AV6 140 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 HES5Q5TA89 166 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 FRG2Q64ET8 278 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SLC25A25Q6KCM7 469 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 CEACAM20Q6UY09 585 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 LRRC70Q7Z2Q7 622 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SYT12Q8IV01 421 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 FBXO22Q8NEZ5 403 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 NEIL3Q8TAT5 605 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 ADAMTS19Q8TE59 1207 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 C2orf15Q8WU43 125 aaKnown RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 MAL2Q969L2 176 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 CHFRQ96EP1 664 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 FRG2BQ96QU4 278 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 PTDSS2Q9BVG9 487 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 CHST8Q9H2A9 424 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 NMNAT1Q9HAN9 279 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 PRDM9Q9NQV7 894 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 MBD1Q9UIS9 605 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 TP53BP1Q12888 1972 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 A0A1B0GW55 424 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 H7C4K7 107 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 J3KTA2 159 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 HPXP02790 462 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 OPN1SWP03999 348 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DUX4L2P0CJ85 424 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DUX4L3P0CJ86 424 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DUX4L4P0CJ87 422 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DUX4L5P0CJ88 424 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DUX4L6P0CJ89 424 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DUX4L7P0CJ90 424 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 CBSLP0DN79 551 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 CBSP35520 551 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 B4GALNT1Q00973 533 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SRSF11Q05519 484 aaKnown RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 PAN3Q58A45 887 aaKnown RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 OR2G6Q5TZ20 316 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 C12orf73Q69YU5 71 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 BCDIN3DQ7Z5W3 292 aaKnown RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 MARCH9Q86YJ5 346 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 GPR135Q8IZ08 494 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SKA2Q8WVK7 121 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SLC12A9Q9BXP2 914 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 TMPRSS13Q9BYE2 586 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 CHIAQ9BZP6 476 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 TMEM161AQ9NX61 479 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 NLGN3Q9NZ94 848 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DUX4Q9UBX2 424 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 BTNL2Q9UIR0 455 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 CHST2Q9Y4C5 530 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 PCDHB11Q9Y5F2 797 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 HEPACAM2A8MVW5 462 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 NPIPB8E9PQR5 432 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 HPP00738 406 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 OSMP13725 252 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 SELLP14151 372 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 COX7A2P14406 83 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 PVALBP20472 110 aaPredicted RBP14.73□□□□□ -0.05
SYNE3-203ENST00000554873 CCND3P30281 292 aaPredicted RBP14.73□□□□□ -0.05
SYNE3-203ENST00000554873 S100A11P31949 105 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 NSG1P42857 185 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 SLC6A12P48065 614 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 ZXDBP98169 803 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 SERTAD2Q14140 314 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 GK2Q14410 553 aaPredicted RBP14.73□□□□□ -0.05
SYNE3-203ENST00000554873 SF1Q15637 639 aaKnown RBP14.73□□□□□ -0.05
SYNE3-203ENST00000554873 HAGHLQ6PII5 290 aaPredicted RBP14.73□□□□□ -0.05
SYNE3-203ENST00000554873 APCDD1Q8J025 514 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 TOMM5Q8N4H5 51 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 TCEANCQ8N8B7 351 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 C11orf65Q8NCR3 313 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 GATAD2BQ8WXI9 593 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 CASD1Q96PB1 797 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 COPS8Q99627 209 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 SPHK1Q9NYA1 384 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms