RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 FAM13CQ8NE31 585 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 SLC22A8Q8TCC7 542 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 SELENOMQ8WWX9 145 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 TANKQ92844 425 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 RGMAQ96B86 450 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 GAL3ST4Q96RP7 486 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 ELOVL6Q9H5J4 265 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 ZFP64Q9NPA5 681 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 SDR39U1Q9NRG7 319 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-215ENST00000554656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.7□□□□□ -0.866e-6■■□□□ 12.1
SHMT2-215ENST00000554656 ZIM2Q9NZV7 527 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 ADGRE2Q9UHX3 823 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 PHF11Q9UIL8 331 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 ACAD8Q9UKU7 415 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 SPACA6W5XKT8 324 aa9.7□□□□□ -0.86
SHMT2-215ENST00000554656 BBIP1A8MTZ0 92 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 B2RBV5 119 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 TRIM3O75382 744 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 GPR75O95800 540 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 CT62P0C5K7 136 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 NR2F6P10588 404 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 NQO1P15559 274 aaKnown RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 GPX3P22352 226 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 MAPK1P28482 360 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 SSTR4P31391 388 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 TRPC1P48995 793 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 ART1P52961 327 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 KCNJ2P63252 427 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 ABCA4P78363 2273 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 CYLC2Q14093 348 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 RPS6KA2Q15349 733 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 NTRK2Q16620 822 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 CPSF6Q16630 551 aaKnown RBP eCLIP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 IMPG1Q17R60 797 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 TCHHL1Q5QJ38 904 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 WLSQ5T9L3 541 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 RIPPLY2Q5TAB7 128 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 FNDC7Q5VTL7 733 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 RNF111Q6ZNA4 994 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 MYLK4Q86YV6 388 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 ULK2Q8IYT8 1036 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 MIER2Q8N344 545 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 SLC15A4Q8N697 577 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 FNDC5Q8NAU1 212 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 OR2T11Q8NH01 316 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 NEIL3Q8TAT5 605 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 WDR20Q8TBZ3 569 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 SARAFQ96BY9 339 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 NTNG2Q96CW9 530 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 ART5Q96L15 291 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 FCRL1Q96LA6 429 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 LIME1Q9H400 295 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 LDAHQ9H6V9 325 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 EXO5Q9H790 373 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 DDX31Q9H8H2 851 aaKnown RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 NMRK1Q9NWW6 199 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 C1orf109Q9NX04 203 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 TEX10Q9NXF1 929 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 MS4A12Q9NXJ0 267 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 TAS2R1Q9NYW7 299 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 NOP53Q9NZM5 478 aaKnown RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 BOKQ9UMX3 212 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 MAPRE3Q9UPY8 281 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 GPR45Q9Y5Y3 372 aa9.69□□□□□ -0.86
SHMT2-215ENST00000554656 FLNAP21333 2647 aaKnown RBP9.69□□□□□ -0.86
SHMT2-215ENST00000554656 FOXE1O00358 373 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-215ENST00000554656 PGRMC2O15173 223 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 GYG2O15488 501 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 OR10H2O60403 315 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 PEX11AO75192 247 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 CTAG2O75638 210 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 PDYNP01213 254 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 GBAP04062 536 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 FAM58BPP0C7Q3 252 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 PRPS2P11908 318 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 CD1EP15812 388 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 NEK2P51955 445 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 IST1P53990 364 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 FBXW4P57775 412 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 PHEXP78562 749 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 CRYZQ08257 329 aaKnown RBP9.68□□□□□ -0.86
SHMT2-215ENST00000554656 SLC25A35Q3KQZ1 300 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 ACSF3Q4G176 576 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-215ENST00000554656 POMZP3Q6PJE2 187 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 ARSKQ6UWY0 536 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 HACD2Q6Y1H2 254 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 SLC29A4Q7RTT9 530 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 WDR53Q7Z5U6 358 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-215ENST00000554656 SNX32Q86XE0 403 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 ZZZ3Q8IYH5 903 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 GLB1L3Q8NCI6 653 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-215ENST00000554656 RBM18Q96H35 190 aaKnown RBP9.68□□□□□ -0.86
SHMT2-215ENST00000554656 JSRP1Q96MG2 331 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-215ENST00000554656 EFCAB1Q9HAE3 211 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 CXorf21Q9HAI6 301 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 LRTM1Q9HBL6 345 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 PRM3Q9NNZ6 103 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 ACKR4Q9NPB9 350 aa9.68□□□□□ -0.86
SHMT2-215ENST00000554656 LYARQ9NX58 379 aaKnown RBP9.68□□□□□ -0.86
SHMT2-215ENST00000554656 SIRT5Q9NXA8 310 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms