RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PROM1O43490 865 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 CHST10O43529 356 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 PRKRAO75569 313 aaKnown RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 STK17BO94768 372 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 KIAA0754O94854 1291 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 AIFM1O95831 613 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 ONECUT2O95948 504 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 IL3P08700 152 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 IDO1P14902 403 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF10P21506 573 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 SLC7A1P30825 629 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 OR1D4P47884 311 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 ZFP36L2P47974 494 aaKnown RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 HNRNPFP52597 415 aaKnown RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 MAPK12P53778 367 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 LIM2P55344 173 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 NME5P56597 212 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 CLDN8P56748 225 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 C21orf58P58505 322 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 TAS2R50P59544 299 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 UFM1P61960 85 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 TRA2BP62995 288 aaKnown RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 POU6F2P78424 691 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 MAT1AQ00266 395 aaKnown RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 MC1RQ01726 317 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 KLC1Q07866 573 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF763Q0D2J5 394 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 KLF10Q13118 480 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 MAD2L1Q13257 205 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 SQLEQ14534 574 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 PTGR1Q14914 329 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 SYT16Q17RD7 645 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 DCAF12Q5T6F0 453 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 NDUFAF5Q5TEU4 345 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 C18orf63Q68DL7 685 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 LCN10Q6JVE6 187 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 PRMT9Q6P2P2 845 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 CYB5D1Q6P9G0 228 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 CEACAM20Q6UY09 585 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 RHOUQ7L0Q8 258 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 GPR180Q86V85 440 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 FUNDC1Q8IVP5 155 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 RIMKLAQ8IXN7 391 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 CACNA2D3Q8IZS8 1091 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 KRTCAP2Q8N6L1 136 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 OR9I1Q8NGQ6 314 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 PROKR1Q8TCW9 393 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 UCN3Q969E3 161 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 MMABQ96EY8 250 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 LRFN5Q96NI6 719 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 CSF3RQ99062 836 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 ZPBPQ9BS86 351 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 NPLQ9BXD5 320 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 AKIRIN1Q9H9L7 192 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 POLR1BQ9H9Y6 1135 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 CLK4Q9HAZ1 481 aaKnown RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 TXLNGQ9NUQ3 528 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 LYARQ9NX58 379 aaKnown RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 FOXJ2Q9P0K8 574 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-212ENST00000554486 HCN3Q9P1Z3 774 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 FBXW2Q9UKT8 454 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 DAPP1Q9UN19 280 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 CDC14AQ9UNH5 594 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 MAU2Q9Y6X3 613 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 CEP295Q9C0D2 2601 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ARHGAP10A1A4S6 786 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 GLOD5A6NK44 160 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 WASHC1A8K0Z3 465 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 GABRR3A8MPY1 467 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 NVLO15381 856 aaKnown RBP5.88□□□□□ -1.47
SCFD1-212ENST00000554486 TBX19O60806 448 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 CCDC22O60826 627 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 JRKO75564 520 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 SLC22A3O75751 556 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 TNFSF15O95150 251 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 UNC5CO95185 931 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 LRATO95237 230 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 HBQ1P09105 142 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 PIM1P11309 404 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-212ENST00000554486 RNH1P13489 461 aaKnown RBP5.88□□□□□ -1.47
SCFD1-212ENST00000554486 FBLP22087 321 aaKnown RBP5.88□□□□□ -1.47
SCFD1-212ENST00000554486 CPN2P22792 545 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 JAK1P23458 1154 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 PIK3R1P27986 724 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 GSTM5P46439 218 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ASMTP46597 345 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 AVPR1BP47901 424 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 EFNA3P52797 238 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 SUMO3P55854 103 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-212ENST00000554486 RAB38P57729 211 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 STX1BP61266 288 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 SKP1P63208 163 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 IRX1P78414 480 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-212ENST00000554486 SHC2P98077 582 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 TNFRSF17Q02223 184 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 C2orf80Q0P641 193 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 PDE7AQ13946 482 aa5.88□□□□□ -1.47
SCFD1-212ENST00000554486 ERV3-1Q14264 604 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms