RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 NTN1O95631 604 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 MT-ND2P03891 347 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 DDX5P17844 614 aaKnown RBP10.96□□□□□ -0.66
SHMT2-212ENST00000554467 BUD31P41223 144 aaPredicted RBP10.96□□□□□ -0.66
SHMT2-212ENST00000554467 XCR1P46094 333 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 GABARAPL2P60520 117 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 RPL6Q02878 288 aaKnown RBP10.96□□□□□ -0.66
SHMT2-212ENST00000554467 NPRL3Q12980 569 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 DEFB133Q30KQ1 61 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 FAM92BQ6ZTR7 304 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 SRFBP1Q8NEF9 429 aaKnown RBP10.96□□□□□ -0.66
SHMT2-212ENST00000554467 NUP43Q8NFH3 380 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 PROX1Q92786 737 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 CITED4Q96RK1 184 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 EPYCQ99645 322 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 EHD3Q9NZN3 535 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 FBXO9Q9UK97 447 aaPredicted RBP10.96□□□□□ -0.66
SHMT2-212ENST00000554467 PILRAQ9UKJ1 303 aa10.96□□□□□ -0.66
SHMT2-212ENST00000554467 LOC100506127A0A0U1RQW1 187 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 ADAMDEC1O15204 470 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 SLC16A6O15403 523 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 GADD45GO95257 159 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 PTTG1O95997 202 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 IFNA14P01570 189 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 LCKP06239 509 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 DCNP07585 359 aaKnown RBP10.95□□□□□ -0.66
SHMT2-212ENST00000554467 IGFBP1P08833 259 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-212ENST00000554467 POU1F1P28069 291 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 MPIP34949 423 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 MASP1P48740 699 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 CLK1P49759 484 aaKnown RBP10.95□□□□□ -0.66
SHMT2-212ENST00000554467 SHC2P98077 582 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 HOXC5Q00444 222 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 PIN1Q13526 163 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-212ENST00000554467 FAHD1Q6P587 224 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 B3GNT8Q7Z7M8 397 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 P3H2Q8IVL5 708 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 TAGAPQ8N103 731 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 OR7G2Q8NG99 324 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 LGALS12Q96DT0 336 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 HSPA12BQ96MM6 686 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 ZNF681Q96N22 645 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 PIP5K1AQ99755 562 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 CCDC3Q9BQI4 270 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 ZBTB20Q9HC78 741 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-212ENST00000554467 POT1Q9NUX5 634 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 KCMF1Q9P0J7 381 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 P2RX2Q9UBL9 471 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 DUSP12Q9UNI6 340 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 PCDHGA2Q9Y5H1 932 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 AGAP5A6NIR3 686 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 CDC123O75794 336 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-212ENST00000554467 TPPPO94811 219 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 IGLV3-19P01714 112 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 MYF5P13349 255 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 TGM3Q08188 693 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 EPS8Q12929 822 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 TSPYL5Q86VY4 417 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-212ENST00000554467 UBQLNLQ8IYU4 475 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 METTL27Q8N6F8 245 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-212ENST00000554467 DTX3Q8N9I9 347 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 OR4C15Q8NGM1 316 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 SLC9A6Q92581 669 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 ELP4Q96EB1 424 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 SLC7A5P2Q9GIP4 190 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 DDX28Q9NUL7 540 aaKnown RBP10.95□□□□□ -0.66
SHMT2-212ENST00000554467 GIMAP4Q9NUV9 329 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 CLCA2Q9UQC9 943 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 PCDHGA10Q9Y5H3 936 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 ENPP4Q9Y6X5 453 aa10.95□□□□□ -0.66
SHMT2-212ENST00000554467 SLC9B1P1A6NJY1 282 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 B3GALT2O43825 422 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 ITGAMP11215 1152 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 ENPP1P22413 925 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 CSNK1EP49674 416 aaKnown RBP10.94□□□□□ -0.66
SHMT2-212ENST00000554467 SEC23BQ15437 767 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 YIF1BQ5BJH7 314 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 SVOPQ8N4V2 548 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 PARP16Q8N5Y8 322 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 CSNK1A1LQ8N752 337 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 BAHD1Q8TBE0 780 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-212ENST00000554467 TM4SF19Q96DZ7 209 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 C10orf90Q96M02 699 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 DEPDC7Q96QD5 511 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 C6orf62Q9GZU0 229 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-212ENST00000554467 NARFLQ9H6Q4 476 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 SEMA3GQ9NS98 782 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 KCNN3Q9UGI6 736 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 PCDHGB1Q9Y5G3 927 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 PCDHGA12O60330 932 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 SOX14O95416 240 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 ALOX12P18054 663 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 SUZ12Q15022 739 aaKnown RBP10.94□□□□□ -0.66
SHMT2-212ENST00000554467 MICAQ29983 383 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 RFX4Q33E94 735 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 TRMT12Q53H54 448 aaKnown RBP10.94□□□□□ -0.66
SHMT2-212ENST00000554467 NKAIN2Q5VXU1 208 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 P2RY8Q86VZ1 359 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 AQP11Q8NBQ7 271 aa10.94□□□□□ -0.66
SHMT2-212ENST00000554467 SLC16A11Q8NCK7 471 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms