RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 STARP49675 285 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 NAA20P61599 178 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 GAB1Q13480 694 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 CCNYL1Q8N7R7 359 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 OR7G2Q8NG99 324 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 LINC01560Q8TB33 94 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 C11orf24Q96F05 449 aaPredicted RBP17.03■□□□□ 0.32
CPSF2-203ENST00000554290 SFXN2Q96NB2 322 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 ALPK1Q96QP1 1244 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 EBPLQ9BY08 206 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 PIGMQ9H3S5 423 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 MID1IP1Q9NPA3 183 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 PSMC3IPQ9P2W1 217 aaPredicted RBP17.03■□□□□ 0.32
CPSF2-203ENST00000554290 FBXL2Q9UKC9 423 aa17.03■□□□□ 0.32
CPSF2-203ENST00000554290 SETD2Q9BYW2 2564 aaPredicted RBP17.03■□□□□ 0.32
CPSF2-203ENST00000554290 PLOD2O00469 737 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 NME6O75414 186 aaPredicted RBP17.02■□□□□ 0.32
CPSF2-203ENST00000554290 SLITRK5O94991 958 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 PYGBP11216 843 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 DDCP20711 480 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 DPP4P27487 766 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 CPA2P48052 419 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 LHX2P50458 406 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 DIO3P55073 304 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 ZNF763Q0D2J5 394 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 C2orf80Q0P641 193 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 FOXF2Q12947 444 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 IMPG1Q17R60 797 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 OR5M10Q6IEU7 315 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 NPSR1Q6W5P4 371 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 LUZP2Q86TE4 346 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 CEP112Q8N8E3 955 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 OR4K17Q8NGC6 315 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 CDC26Q8NHZ8 85 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 EFHD2Q96C19 240 aaPredicted RBP17.02■□□□□ 0.32
CPSF2-203ENST00000554290 INTS12Q96CB8 462 aaKnown RBP17.02■□□□□ 0.32
CPSF2-203ENST00000554290 KCNA7Q96RP8 456 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 YIPF4Q9BSR8 244 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 GSTO2Q9H4Y5 243 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 MIEF1Q9NQG6 463 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 CLCF1Q9UBD9 225 aa17.02■□□□□ 0.32
CPSF2-203ENST00000554290 ITPR3Q14573 2671 aa17.02■□□□□ 0.31
CPSF2-203ENST00000554290 A0A087WV62 115 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 MYO1GB0I1T2 1018 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 H3BQF6 201 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 KIF2AO00139 706 aaPredicted RBP17.01■□□□□ 0.31
CPSF2-203ENST00000554290 RAF1P04049 648 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 ZNF708P17019 499 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 KLK2P20151 261 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 NCBP2P52298 156 aaKnown RBP eCLIP17.01■□□□□ 0.31
CPSF2-203ENST00000554290 DSCR4P56555 118 aaPredicted RBP17.01■□□□□ 0.31
CPSF2-203ENST00000554290 ZNF155Q12901 538 aaPredicted RBP17.01■□□□□ 0.31
CPSF2-203ENST00000554290 SLC29A2Q14542 456 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 BCL2A1Q16548 175 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 CYP27C1Q4G0S4 372 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 PAMR1Q6UXH9 720 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 CHMP1BQ7LBR1 199 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 GRAMD2AQ8IUY3 354 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 GCNT2Q8N0V5 402 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 RNF138Q8WVD3 245 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 MBD6Q96DN6 1003 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 G6PC3Q9BUM1 346 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 SDHAF3Q9NRP4 125 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 GALNT8Q9NY28 637 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 TAS2R7Q9NYW3 318 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 PPP4R1LQ9P1A2 415 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 TBK1Q9UHD2 729 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 GRID1Q9ULK0 1009 aa17.01■□□□□ 0.31
CPSF2-203ENST00000554290 WBP11Q9Y2W2 641 aaKnown RBP17.01■□□□□ 0.31
CPSF2-203ENST00000554290 ZIC3O60481 467 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 JUNP05412 331 aaKnown RBP17■□□□□ 0.31
CPSF2-203ENST00000554290 MYL2P10916 166 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 NTSP30990 170 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 GAS1P54826 345 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 CLDN18P56856 261 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 PSG6Q00889 435 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 KEAP1Q14145 624 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 SH2D4BQ5SQS7 431 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 OR4N2Q8NGD1 307 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 FAM76AQ8TAV0 307 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 DACH2Q96NX9 599 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 MYNNQ9NPC7 610 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 NDRG3Q9UGV2 375 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 MRTO4Q9UKD2 239 aaKnown RBP17■□□□□ 0.31
CPSF2-203ENST00000554290 PACSIN3Q9UKS6 424 aa17■□□□□ 0.31
CPSF2-203ENST00000554290 C19orf53Q9UNZ5 99 aaPredicted RBP17■□□□□ 0.31
CPSF2-203ENST00000554290 RPH3AQ9Y2J0 694 aaPredicted RBP17■□□□□ 0.31
CPSF2-203ENST00000554290 MTORP42345 2549 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 KIAA1549Q9HCM3 1950 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 UBFD1O14562 309 aaKnown RBP16.99■□□□□ 0.31
CPSF2-203ENST00000554290 CASKO14936 926 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 GLRA3O75311 464 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 CRCPO75575 148 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 CRHP06850 196 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 PEPDP12955 493 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 EVI2BP34910 448 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 ZNHIT3Q15649 155 aaPredicted RBP16.99■□□□□ 0.31
CPSF2-203ENST00000554290 DECR1Q16698 335 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 OR2A2Q6IF42 318 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 FAM71E1Q6IPT2 247 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms