RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ATP6AP2A0A1C7CYW4 349 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ESYT2A0FGR8 921 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 LRRC30A6NM36 301 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TMCO5BA8MYB1 307 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 SNURFLB1AK76 121 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TCP11X1B4DZS4 312 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 H0YL77 283 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 SH2D1BO14796 132 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ZSCAN12O43309 604 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TIMM8AO60220 97 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 TPST2O60704 377 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 CDH16O75309 829 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 GLRA3O75311 464 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 MTRF1O75570 445 aaKnown RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 SCGNO76038 276 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 NXPH2O95156 264 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 NADKO95544 446 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 GOT2P00505 430 aaKnown RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 ATP1B1P05026 303 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 GSTA1P08263 222 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ALOX5P09917 674 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 CCDC172P0C7W6 258 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ANXA3P12429 323 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 GP9P14770 177 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ACADSP16219 412 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TNNI1P19237 187 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 MX1P20591 662 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 LONP1P36776 959 aaKnown RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 ALDH3B1P43353 468 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 MAGEA5P43359 124 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 CD151P48509 253 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ACADVLP49748 655 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 PPT1P50897 306 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TPMTP51580 245 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 CLCN4P51793 760 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 AP3M2P53677 418 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 MAZP56270 477 aaKnown RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 RPS4XP62701 263 aaKnown RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 RPL23AP62750 156 aaKnown RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 HERVK_113P63132 956 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ERVK-8P63133 956 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 MYL7Q01449 175 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 MAP2K1Q02750 393 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 GABPAQ06546 454 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 CNTN1Q12860 1018 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 IL18Q14116 193 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 SYCP1Q15431 976 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 PARP6Q2NL67 630 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ZNF528Q3MIS6 628 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 GTDC1Q4AE62 458 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 PDLIM3Q53GG5 364 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 HSP90B2PQ58FF3 399 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 FBXO48Q5FWF7 155 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 SPANXN2Q5MJ10 180 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 DCAF10Q5QP82 559 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 BEND6Q5SZJ8 279 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 DCAF12Q5T6F0 453 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 DDI2Q5TDH0 399 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ATL3Q6DD88 541 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 SLC39A4Q6P5W5 647 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 BHLHB9Q6PI77 547 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 Q6ZPB1 254 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 C19orf35Q6ZS72 473 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 PAQR9Q6ZVX9 377 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 RFPL4BQ6ZWI9 263 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 CCDC80Q76M96 950 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 CENPQQ7L2Z9 268 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 ACOT1Q86TX2 421 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 SLC22A16Q86VW1 577 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ECHDC2Q86YB7 292 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 WDR49Q8IV35 697 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 CCDC36Q8IYA8 594 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ZNF683Q8IZ20 524 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 RCOR2Q8IZ40 523 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 LINC00518Q8N0U6 118 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 PYROXD2Q8N2H3 581 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ARFGAP2Q8N6H7 521 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TMEM99Q8N816 258 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 DRAXINQ8NBI3 349 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 MNS1Q8NEH6 495 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 SPATA4Q8NEY3 305 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 STXBP6Q8NFX7 210 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 OR2T6Q8NHC8 308 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 KCNG3Q8TAE7 436 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 PHLDA1Q8WV24 401 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 SPRYD4Q8WW59 207 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 PIK3R3Q92569 461 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 EMG1Q92979 244 aaKnown RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 MCUR1Q96AQ8 359 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 LRRC39Q96DD0 335 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 GMPPAQ96IJ6 420 aaPredicted RBP1.96□□□□□ -2.1
SRP54-204ENST00000553923 C4orf45Q96LM5 186 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TSNARE1Q96NA8 513 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 TECTBQ96PL2 329 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 ERGIC2Q96RQ1 377 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 S1PR3Q99500 378 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 BPIFA3Q9BQP9 254 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 RHNO1Q9BSD3 238 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 CHRDL1Q9BU40 450 aa1.96□□□□□ -2.1
SRP54-204ENST00000553923 RBM24Q9BX46 236 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms