RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PPIAP62937 165 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 PPP2R2AP63151 447 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 MRPS35P82673 323 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 PRR5P85299 388 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 PMP22Q01453 160 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 HSPB3Q12988 150 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 MRPL49Q13405 166 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 EFR3AQ14156 821 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 CEBPEQ15744 281 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 EIF2S3LQ2VIR3 472 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 SPDYE7PQ495Y7 208 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 TRMT12Q53H54 448 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF628Q5EBL2 1059 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 CPTPQ5TA50 214 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 TMEM107Q6UX40 140 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 NUP54Q7Z3B4 507 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 MDGA2Q7Z553 956 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 WDR75Q8IWA0 830 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 LRRC34Q8IZ02 419 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 CPSF7Q8N684 471 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 VPS37AQ8NEZ2 397 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 OR2M7Q8NG81 312 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 OR5M3Q8NGP4 307 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 ARL8AQ96BM9 186 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 CTHRC1Q96CG8 243 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 CHMP6Q96FZ7 201 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 EGLN2Q96KS0 407 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 FCRL1Q96LA6 429 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 JSRP1Q96MG2 331 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 TAAR6Q96RI8 345 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 SECISBP2Q96T21 854 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 ZBTB18Q99592 522 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 DOHHQ9BU89 302 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 ITPAQ9BY32 194 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 NUF2Q9BZD4 464 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 DPY30Q9C005 99 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 GLIPR2Q9H4G4 154 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 LDAHQ9H6V9 325 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 EXO5Q9H790 373 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 Q9N2J8 555 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 ACSS1Q9NUB1 689 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 INTS9Q9NV88 658 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 OSGIN2Q9Y236 505 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 KALRNO60229 2985 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 TRGV8A0A0C4DH27 118 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ANKRD34BA5PLL1 514 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 FRG2CA6NGY1 282 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 G3V3Y1 287 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PLOD2O00469 737 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PRRG2O14669 202 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 KLF11O14901 512 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SCAMP2O15127 329 aaKnown RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 EMC8O43402 210 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ASNA1O43681 348 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 CDC40O60508 579 aaKnown RBP eCLIP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PPM1BO75688 479 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SNX4O95219 450 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 KCNH1O95259 989 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 CBX7O95931 251 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 KRT16P08779 473 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 IFI6P09912 130 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 TACR1P25103 407 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ABCD3P28288 659 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PTGER1P34995 402 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 MC3RP41968 323 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 UQCRFS1P47985 274 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PRIM2P49643 509 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PRKAG1P54619 331 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 MGAT2Q10469 447 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 TP53BP2Q13625 1128 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 NNATQ16517 81 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 NTRK2Q16620 822 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 DECR1Q16698 335 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PGS1Q32NB8 556 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF791Q3KP31 576 aaPredicted RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ANKRD26P1Q6NSI1 321 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 MTFR2Q6P444 385 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 BHLHB9Q6PI77 547 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ACAD11Q709F0 780 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SPATA19Q7Z5L4 167 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SLC44A2Q8IWA5 706 aaPredicted RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PRR22Q8IZ63 422 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 SLC34A3Q8N130 599 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 FBXW8Q8N3Y1 598 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ARFGAP2Q8N6H7 521 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ZFP62Q8NB50 900 aaPredicted RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 NUP43Q8NFH3 380 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PIWIL2Q8TC59 973 aaKnown RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 PAQR8Q8TEZ7 354 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 OR5P2Q8WZ92 322 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF75CPQ92670 426 aaPredicted RBP7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ADIPOR1Q96A54 375 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 MOAP1Q96BY2 351 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 OMA1Q96E52 524 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ELP4Q96EB1 424 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF597Q96LX8 424 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 C3orf30Q96M34 536 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 GPR137Q96N19 417 aa7.67□□□□□ -1.18
PSEN1-209ENST00000553855 AMDHD1Q96NU7 426 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms