RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 POU2F1P14859 743 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 DDCP20711 480 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 CNR2P34972 360 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 RPS26P62854 115 aaKnown RBP11.53□□□□□ -0.56
SHMT2-207ENST00000553837 CDK6Q00534 326 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 UBE3AQ05086 875 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 IFI44LQ53G44 452 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 CLLU1Q5K131 121 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 LIPKQ5VXJ0 399 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 FAM109BQ6ICB4 259 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-207ENST00000553837 FRMPD2BQ6IN97 320 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 LCTLQ6UWM7 567 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 OR8K5Q8NH50 307 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 TFGQ92734 400 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-207ENST00000553837 UCN3Q969E3 161 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 GTPBP3Q969Y2 492 aaKnown RBP11.53□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF514Q96K75 400 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-207ENST00000553837 F2RL3Q96RI0 385 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 SOSTQ9BQB4 213 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 TMEM43Q9BTV4 400 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 SLC6A15Q9H2J7 730 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 NT5DC2Q9H857 520 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 C5AR2Q9P296 337 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 TAC3Q9UHF0 121 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 RPL36Q9Y3U8 105 aaKnown RBP11.53□□□□□ -0.56
SHMT2-207ENST00000553837 CDH10Q9Y6N8 788 aa11.53□□□□□ -0.56
SHMT2-207ENST00000553837 PCDH17O14917 1159 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 PLOD3O60568 738 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 B4GALT2O60909 372 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 PTP4A3O75365 173 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 NFATC1O95644 943 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 HOXD4P09016 255 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-207ENST00000553837 BTF3P20290 206 aaKnown RBP11.52□□□□□ -0.56
SHMT2-207ENST00000553837 DRD3P35462 400 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 SOAT1P35610 550 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 CHI3L1P36222 383 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-207ENST00000553837 OPRD1P41143 372 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 CENPAP49450 140 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 PCBP3P57721 371 aaKnown RBP11.52□□□□□ -0.56
SHMT2-207ENST00000553837 TAS2R38P59533 333 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 RAB14P61106 215 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 SNRPGP62308 76 aaKnown RBP11.52□□□□□ -0.56
SHMT2-207ENST00000553837 DBPQ10586 325 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-207ENST00000553837 POU4F3Q15319 338 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 GPR139Q6DWJ6 353 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 C22orf42Q6IC83 251 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 UNC5DQ6UXZ4 953 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 ZNF730Q6ZMV8 503 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 ADGRG3Q86Y34 549 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 TMEM145Q8NBT3 493 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 OR9Q2Q8NGE9 314 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 CXorf40AQ8TE69 158 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 SETD7Q8WTS6 366 aaKnown RBP11.52□□□□□ -0.56
SHMT2-207ENST00000553837 FGF13Q92913 245 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 PHF21AQ96BD5 680 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 SORCS2Q96PQ0 1159 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 NELL2Q99435 816 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 IER2Q9BTL4 223 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 MED28Q9H204 178 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 TMEM38AQ9H6F2 299 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 LHX9Q9NQ69 397 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 FTSJ1Q9UET6 329 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 NCKAP1Q9Y2A7 1128 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 SNX11Q9Y5W9 270 aa11.52□□□□□ -0.56
SHMT2-207ENST00000553837 ALPK3Q96L96 1907 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 A0A1W2PPV9 198 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 TBC1D3BA6NDS4 549 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 SGK494L7N484 410 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 EPHX1P07099 455 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 HBQ1P09105 142 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 ERGP11308 486 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 FCARP24071 287 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 WASP42768 502 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 ERVK-21P61565 698 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 LRRC74AQ0VAA2 488 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 KLHL22Q53GT1 634 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 RPS26P11Q5JNZ5 115 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-207ENST00000553837 GPAT4Q86UL3 456 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 AMZ2Q86W34 360 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 TAGAPQ8N103 731 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 AMER3Q8N944 861 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 TMEM163Q8TC26 289 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 RAD51AP1Q96B01 352 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 PPP1R16AQ96I34 528 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 KCNJ15Q99712 375 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 WACQ9BTA9 647 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 CLEC4MQ9H2X3 399 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-207ENST00000553837 EMC7Q9NPA0 242 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 MBNL1Q9NR56 388 aaKnown RBP11.52□□□□□ -0.57
SHMT2-207ENST00000553837 THSD1Q9NS62 852 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 FKBP7Q9Y680 259 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 CACNG2Q9Y698 323 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 STON1Q9Y6Q2 735 aa11.52□□□□□ -0.57
SHMT2-207ENST00000553837 LOC102723532A0A0G2JNH3 316 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 PRSS44E7EML9 344 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 RNGTTO60942 597 aaKnown RBP11.51□□□□□ -0.57
SHMT2-207ENST00000553837 RB1P06400 928 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 RRASP10301 218 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 ARAFP10398 606 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 HK1P19367 917 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms