RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 OR5M1Q8NGP8 315 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 PIWIL2Q8TC59 973 aaKnown RBP12.31□□□□□ -0.44
PRPF39-204ENST00000553605 MAIP1Q8WWC4 291 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 TMBIM1Q969X1 311 aa12.31□□□□□ -0.44
PRPF39-204ENST00000553605 OR2M5A3KFT3 312 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 SERINC4A6NH21 518 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 TO15178 435 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 CCNT2O60583 730 aaKnown RBP12.3□□□□□ -0.44
PRPF39-204ENST00000553605 TTC4O95801 387 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 FGGP02679 453 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 PPICP45877 212 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 GAS1P54826 345 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 SLMAPQ14BN4 828 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 EXOSC7Q15024 291 aaKnown RBP12.3□□□□□ -0.44
PRPF39-204ENST00000553605 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRPF39-204ENST00000553605 SULT1C3Q6IMI6 304 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 FAM111BQ6SJ93 734 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 HUS1BQ8NHY5 278 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 CERS2Q96G23 380 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 SLC35A4Q96G79 324 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 ADOQ96SZ5 270 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 ZNF717Q9BY31 904 aaPredicted RBP12.3□□□□□ -0.44
PRPF39-204ENST00000553605 BRINP2Q9C0B6 783 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 DSN1Q9H410 356 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 C12orf49Q9H741 205 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 DDX31Q9H8H2 851 aaKnown RBP12.3□□□□□ -0.44
PRPF39-204ENST00000553605 FBXO34Q9NWN3 711 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 XPR1Q9UBH6 696 aa12.3□□□□□ -0.44
PRPF39-204ENST00000553605 C17orf51A8MQB3 221 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 SHISA9B4DS77 424 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 TGFAP01135 160 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 CSF3P09919 207 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 CPMP14384 443 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 PORP16435 677 aaPredicted RBP12.29□□□□□ -0.44
PRPF39-204ENST00000553605 IL32P24001 234 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 BSGP35613 385 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 EIF1AXP47813 144 aaKnown RBP12.29□□□□□ -0.44
PRPF39-204ENST00000553605 COMPP49747 757 aaPredicted RBP12.29□□□□□ -0.44
PRPF39-204ENST00000553605 CDH11P55287 796 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 IRF9Q00978 393 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 DEFA6Q01524 100 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 MGAT2Q10469 447 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 MAP4K2Q12851 820 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 PRICKLE4Q2TBC4 344 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 CR1LQ2VPA4 569 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 CDKL4Q5MAI5 379 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 SFRP5Q5T4F7 317 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 C11orf71Q6IPW1 123 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 EXOC3L1Q86VI1 746 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 NAT8LQ8N9F0 302 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 FADS6Q8N9I5 356 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 MTERF1Q99551 399 aaKnown RBP12.29□□□□□ -0.44
PRPF39-204ENST00000553605 LRRC1Q9BTT6 524 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 GLRX2Q9NS18 164 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 CBLN4Q9NTU7 201 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 PPP4R1LQ9P1A2 415 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 PLLPQ9Y342 182 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 AP4B1Q9Y6B7 739 aa12.29□□□□□ -0.44
PRPF39-204ENST00000553605 CADP27708 2225 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 TSPAN2O60636 221 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 GCM2O75603 506 aaPredicted RBP12.28□□□□□ -0.44
PRPF39-204ENST00000553605 GBAP04062 536 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 PTX3P26022 381 aaPredicted RBP12.28□□□□□ -0.44
PRPF39-204ENST00000553605 TTKP33981 857 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 PIK3CBP42338 1070 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 TAS2R39P59534 338 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 EFR3AQ14156 821 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 GGTLC2Q14390 218 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 GANABQ14697 944 aaKnown RBP12.28□□□□□ -0.44
PRPF39-204ENST00000553605 MFSD12Q6NUT3 480 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 SEZ6L2Q6UXD5 910 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 GABRG1Q8N1C3 465 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 TXLNBQ8N3L3 684 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 RNF10Q8N5U6 811 aaKnown RBP12.28□□□□□ -0.44
PRPF39-204ENST00000553605 BANPQ8N9N5 519 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 OR2M3Q8NG83 312 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 OR52B6Q8NGF0 335 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 ZFAND2BQ8WV99 257 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 RNF138Q8WVD3 245 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 PRR14Q9BWN1 585 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 CD244Q9BZW8 370 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 MED11Q9P086 117 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 PRODH2Q9UF12 536 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 ASIC3Q9UHC3 531 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 ZNF639Q9UID6 485 aa12.28□□□□□ -0.44
PRPF39-204ENST00000553605 GPR55Q9Y2T6 319 aaPredicted RBP12.28□□□□□ -0.44
PRPF39-204ENST00000553605 EIF1AYO14602 144 aaKnown RBP12.27□□□□□ -0.45
PRPF39-204ENST00000553605 APEHP13798 732 aaKnown RBP12.27□□□□□ -0.45
PRPF39-204ENST00000553605 KRT20P35900 424 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 SRP14P37108 136 aaKnown RBP12.27□□□□□ -0.45
PRPF39-204ENST00000553605 GGNQ86UU5 652 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 CCDC25Q86WR0 208 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 SPATA6LQ8N4H0 392 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 OR52R1Q8NGF1 315 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 HBEGFQ99075 208 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 USB1Q9BQ65 265 aaKnown RBP12.27□□□□□ -0.45
PRPF39-204ENST00000553605 DERL2Q9GZP9 239 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 DDX47Q9H0S4 455 aaKnown RBP12.27□□□□□ -0.45
PRPF39-204ENST00000553605 PTGES2Q9H7Z7 377 aa12.27□□□□□ -0.45
PRPF39-204ENST00000553605 SMYD2Q9NRG4 433 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms