RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 KRCC1Q9NPI7 259 aaPredicted RBP4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 LHX9Q9NQ69 397 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 TIGARQ9NQ88 270 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 SPHK2Q9NRA0 654 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 CYSLTR2Q9NS75 346 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 GIMAP4Q9NUV9 329 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 RNF186Q9NXI6 227 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 B3GNT2Q9NY97 397 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 IL20Q9NYY1 176 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 TVP23BQ9NYZ1 205 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 NTMQ9P121 344 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 COPZ2Q9P299 210 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 NDRG2Q9UN36 371 aaKnown RBP4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 SLC27A6Q9Y2P4 619 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 AUP1Q9Y679 476 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 STON1Q9Y6Q2 735 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 COL4A2P08572 1712 aa4.94□□□□□ -1.62
TMEM55B-204ENST00000553602 MTCL1Q9Y4B5 1905 aaKnown RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ABHD14A-ACY1A0A1B0GW23 586 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 NOTOA8MTQ0 251 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 NEDD8-MDP1E9PL57 170 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 J3QRE1 110 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 GABRPO00591 440 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 MAN2B1O00754 1011 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 EREGO14944 169 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 SURF4O15260 269 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ATXN7O15265 892 aaPredicted RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 TGM5O43548 720 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 TLX2O43763 284 aaPredicted RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 TMPRSS11DO60235 418 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ITGA10O75578 1167 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 RGS9O75916 674 aaPredicted RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 EPPINO95925 133 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 AGR2O95994 175 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 GBAP04062 536 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 EPHX1P07099 455 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 C8AP07357 584 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 FHP07954 510 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 NR2F1P10589 423 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 CHRNB1P11230 501 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 TYRP14679 529 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ARSBP15848 533 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 TNNI3P19429 210 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 F8A1P23610 371 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 SLC6A1P30531 599 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 IL12RB1P42701 662 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 OMPP47874 163 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 SLC6A11P48066 632 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 RFX3P48380 749 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 CDH11P55287 796 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 P2RX3P56373 397 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ABATP80404 500 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 CAP1Q01518 475 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 FUT5Q11128 374 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ST3GAL3Q11203 375 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ZNF155Q12901 538 aaPredicted RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 HSPB3Q12988 150 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 CCINQ13939 588 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ZIC1Q15915 447 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 SNAPC1Q16533 368 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 PGGHGQ32M88 737 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ARHGAP15Q53QZ3 475 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 EOGTQ5NDL2 527 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ZNF648Q5T619 568 aaPredicted RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 PLPP4Q5VZY2 271 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 TMEM215Q68D42 235 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 MRM1Q6IN84 353 aaKnown RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 KIAA1161Q6NSJ0 714 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ACSM5Q6NUN0 579 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 WASH2PQ6VEQ5 465 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ZNF620Q6ZNG0 422 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 WDR53Q7Z5U6 358 aaPredicted RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ASPGQ86U10 573 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 IQCHQ86VS3 1027 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 KIF18BQ86Y91 864 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 TRAPPC5Q8IUR0 188 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ZNF547Q8IVP9 402 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 GPALPP1Q8IXQ4 340 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 SAMD14Q8IZD0 417 aaPredicted RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 KLHL36Q8N4N3 616 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 RAB42Q8N4Z0 105 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 YIPF7Q8N8F6 280 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ANKRD53Q8N9V6 530 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 TEX19Q8NA77 164 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ATP6V1C2Q8NEY4 427 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 OR8D4Q8NGM9 314 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 OR5M3Q8NGP4 307 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 OR5K2Q8NHB8 316 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 PIGXQ8TBF5 258 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 RAET1EQ8TD07 263 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 SLC2A12Q8TD20 617 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 BRIX1Q8TDN6 353 aaKnown RBP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 AKAP1Q92667 903 aaKnown RBP eCLIP4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 PMM1Q92871 262 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 RAB7BQ96AH8 199 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 OTULINQ96BN8 352 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 UPRTQ96BW1 309 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 ERLEC1Q96DZ1 483 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 C1GALT1C1Q96EU7 318 aa4.93□□□□□ -1.62
TMEM55B-204ENST00000553602 OTUB1Q96FW1 271 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms