RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 UBTD1Q9HAC8 227 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 ZNF226Q9NYT6 803 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 MAT2BQ9NZL9 334 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 PPP4R1LQ9P1A2 415 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 NFU1Q9UMS0 254 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 EXO1Q9UQ84 846 aaKnown RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 RPH3AQ9Y2J0 694 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-208ENST00000553370 WIF1Q9Y5W5 379 aa9.01□□□□□ -0.97
ACTN1-208ENST00000553370 FRG2CA6NGY1 282 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 SLC22A20A6NK97 555 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 FAM171A2A8MVW0 826 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 STX16-NPEPL1H3BU86 382 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 PLOD2O00469 737 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 STX16O14662 325 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 SCO2O43819 266 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 AVPP01185 164 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 PDYNP01213 254 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 KRT6AP02538 564 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 ALDOAP04075 364 aaKnown RBP9□□□□□ -0.97
ACTN1-208ENST00000553370 KRT6BP04259 564 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 INHBBP09529 407 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 CPN1P15169 458 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
ACTN1-208ENST00000553370 TSPAN8P19075 237 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 TAC1P20366 129 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 CHMP24386 653 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 SRD5A2P31213 254 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 KRT6CP48668 564 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 STARP49675 285 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 SERPINB9P50453 376 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 SIRPAP78324 504 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 PSPHP78330 225 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 NKX6-1P78426 367 aaPredicted RBP9□□□□□ -0.97
ACTN1-208ENST00000553370 SLC7A5Q01650 507 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 MAP4K2Q12851 820 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 FOXF2Q12947 444 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 TRAF3Q13114 568 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 STX5Q13190 355 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 LAPTM4AQ15012 233 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 GGTA1PQ4G0N0 100 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 Q5PR19 223 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 SH2D4BQ5SQS7 431 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 RAET1LQ5VY80 246 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 OR5M10Q6IEU7 315 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 OR2A2Q6IF42 318 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 FAM180BQ6P0A1 224 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 PLXDC2Q6UX71 529 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 SAMD14Q8IZD0 417 aaPredicted RBP9□□□□□ -0.97
ACTN1-208ENST00000553370 SLC44A1Q8WWI5 657 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 HGDQ93099 445 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 EXOSC8Q96B26 276 aaKnown RBP9□□□□□ -0.97
ACTN1-208ENST00000553370 BBS4Q96RK4 519 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 ADOQ96SZ5 270 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 HBEGFQ99075 208 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 CCL19Q99731 98 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 NTMT1Q9BV86 223 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 ACSS3Q9H6R3 686 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 BRF2Q9HAW0 419 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 FARSBQ9NSD9 589 aaKnown RBP9□□□□□ -0.97
ACTN1-208ENST00000553370 PYCARDQ9ULZ3 195 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 PRR14LQ5THK1 2151 aa9□□□□□ -0.97
ACTN1-208ENST00000553370 SONP18583 2426 aaKnown RBP9□□□□□ -0.97
ACTN1-208ENST00000553370 NUP214P35658 2090 aaPredicted RBP9□□□□□ -0.97
ACTN1-208ENST00000553370 CCDC151A5D8V7 595 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 OR6C70A6NIJ9 312 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 POC1B-GALNT4F8VUJ3 575 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 SMAD7O15105 426 aaKnown RBP8.99□□□□□ -0.97
ACTN1-208ENST00000553370 SEC14L5O43304 696 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 PCDH7O60245 1069 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 RCBTB2O95199 551 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 CBX7O95931 251 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 HRGP04196 525 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 IL3P08700 152 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 DRD5P21918 477 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 GRK2P25098 689 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 DPP4P27487 766 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 PPICP45877 212 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 SLCO1A2P46721 670 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 RFX3P48380 749 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 CLK3P49761 638 aaKnown RBP8.99□□□□□ -0.97
ACTN1-208ENST00000553370 EEFSECP57772 596 aaKnown RBP8.99□□□□□ -0.97
ACTN1-208ENST00000553370 TRA2BP62995 288 aaKnown RBP8.99□□□□□ -0.97
ACTN1-208ENST00000553370 GUCY2DQ02846 1103 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 ACSM2AQ08AH3 577 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 TRADDQ15628 312 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 TRMT12Q53H54 448 aaKnown RBP8.99□□□□□ -0.97
ACTN1-208ENST00000553370 SHEQ5VZ18 495 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 ACSM2BQ68CK6 577 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 TMEM81Q6P7N7 255 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 POMZP3Q6PJE2 187 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 ZDHHC24Q6UX98 284 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 RPS27LQ71UM5 84 aaKnown RBP8.99□□□□□ -0.97
ACTN1-208ENST00000553370 SLC44A2Q8IWA5 706 aaPredicted RBP8.99□□□□□ -0.97
ACTN1-208ENST00000553370 FAM9CQ8IZT9 166 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 PLD6Q8N2A8 252 aaKnown RBP8.99□□□□□ -0.97
ACTN1-208ENST00000553370 CDYL2Q8N8U2 506 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 TRPC4APQ8TEL6 797 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 SMPDL3BQ92485 455 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 KAT2AQ92830 837 aa8.99□□□□□ -0.97
ACTN1-208ENST00000553370 EFHD2Q96C19 240 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms