RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 CUL3Q13618 768 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 TSC22D1Q15714 1073 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 ETFDHQ16134 617 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 CPSF6Q16630 551 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDK4-213ENST00000552713 PGGHGQ32M88 737 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 ADAM5Q6NVV9 412 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 TREML4Q6UXN2 200 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 NPSR1Q6W5P4 371 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 FAM214BQ7L5A3 538 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 NUDT13Q86X67 352 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 PDIK1LQ8N165 341 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 ARIH2OSQ8N7S6 290 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 FADS6Q8N9I5 356 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 FBXO36Q8NEA4 188 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 OR2M3Q8NG83 312 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 OR4N2Q8NGD1 307 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 WDR20Q8TBZ3 569 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 GRK7Q8WTQ7 553 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 REPS1Q96D71 796 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 TRMT61AQ96FX7 289 aaKnown RBP7.59□□□□□ -1.19
CDK4-213ENST00000552713 SLC35A4Q96G79 324 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 COL21A1Q96P44 957 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 NAP1L3Q99457 506 aaPredicted RBP7.59□□□□□ -1.19
CDK4-213ENST00000552713 CENPKQ9BS16 269 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 ACTR6Q9GZN1 396 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 PLSCR4Q9NRQ2 329 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 FLRT3Q9NZU0 649 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 MED11Q9P086 117 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 GPR55Q9Y2T6 319 aaPredicted RBP7.59□□□□□ -1.19
CDK4-213ENST00000552713 RNF11Q9Y3C5 154 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 JRKLQ9Y4A0 524 aa7.59□□□□□ -1.19
CDK4-213ENST00000552713 OR2M5A3KFT3 312 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 H0YIV9 168 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 PGRMC1O00264 195 aaKnown RBP7.58□□□□□ -1.2
CDK4-213ENST00000552713 CLOCKO15516 846 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 SCO2O43819 266 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 ERAL1O75616 437 aaKnown RBP7.58□□□□□ -1.2
CDK4-213ENST00000552713 NTN1O95631 604 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 ATP1B1P05026 303 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 CT45A8P0DMV1 189 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 CT45A9P0DMV2 189 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 PPP3CBP16298 524 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 HK1P19367 917 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 SLC12A2P55011 1212 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 DSCR4P56555 118 aaPredicted RBP7.58□□□□□ -1.2
CDK4-213ENST00000552713 PDIA2Q13087 525 aaKnown RBP7.58□□□□□ -1.2
CDK4-213ENST00000552713 ZKSCAN8Q15776 578 aaPredicted RBP7.58□□□□□ -1.2
CDK4-213ENST00000552713 TMEM249Q2WGJ8 235 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 CT45A2Q5DJT8 189 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 C6orf163Q5TEZ5 329 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 RAET1LQ5VY80 246 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 LIPJQ5W064 366 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 SEZ6L2Q6UXD5 910 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 CMC1Q7Z7K0 106 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 KBTBD8Q8NFY9 601 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 OR4K17Q8NGC6 315 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 SMAP2Q8WU79 429 aaPredicted RBP7.58□□□□□ -1.2
CDK4-213ENST00000552713 FBXW5Q969U6 566 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 GTPBP3Q969Y2 492 aaKnown RBP7.58□□□□□ -1.2
CDK4-213ENST00000552713 EFHD2Q96C19 240 aaPredicted RBP7.58□□□□□ -1.2
CDK4-213ENST00000552713 TMCO6Q96DC7 493 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 PBKQ96KB5 322 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 CDK15Q96Q40 435 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 OSBPL9Q96SU4 736 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 GPR22Q99680 433 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 NTMT1Q9BV86 223 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 MRPL1Q9BYD6 325 aaKnown RBP7.58□□□□□ -1.2
CDK4-213ENST00000552713 FOLH1BQ9HBA9 442 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 NUDT4Q9NZJ9 180 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 CDC42EP3Q9UKI2 254 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 ZNF175Q9Y473 711 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 RNF115Q9Y4L5 304 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 PCDHGA11Q9Y5H2 935 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 PCDHA9Q9Y5H5 950 aa7.58□□□□□ -1.2
CDK4-213ENST00000552713 FAM234BA2RU67 622 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 FOXE1O00358 373 aaPredicted RBP7.57□□□□□ -1.2
CDK4-213ENST00000552713 ZSCAN12O43309 604 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 SSX4O60224 188 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 OPN1LWP04000 364 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 STMN1P16949 149 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 RUNX1T1Q06455 604 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 STX5Q13190 355 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 FGFBP1Q14512 234 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 MORF4L2Q15014 288 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDK4-213ENST00000552713 NCMAPQ5T1S8 102 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 PPP4R4Q6NUP7 873 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 MFSD12Q6NUT3 480 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 SLC48A1Q6P1K1 146 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 IL17RELQ6ZVW7 336 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 LARP4Q71RC2 724 aaKnown RBP eCLIP7.57□□□□□ -1.24e-9■■■□□ 19.2
CDK4-213ENST00000552713 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.57□□□□□ -1.2
CDK4-213ENST00000552713 MILR1Q7Z6M3 343 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 GGNQ86UU5 652 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 ZNF619Q8N2I2 560 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 METTL25Q8N6Q8 603 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 OR6K3Q8NGY3 331 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 STAG3L4Q8TBR4 150 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 HTRA1Q92743 480 aa7.57□□□□□ -1.2
CDK4-213ENST00000552713 KAT2AQ92830 837 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms