RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 GRB14Q14449 540 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 HNF4GQ14541 408 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 CDKN3Q16667 212 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 ALG10Q5BKT4 473 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 ZNF542PQ5EBM4 170 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 ALG10BQ5I7T1 473 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 ELFN2Q5R3F8 820 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 MFSD14CQ5VZR4 134 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 RTL6Q6ICC9 239 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 TMEM65Q6PI78 240 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 CWC27Q6UX04 472 aaKnown RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 ASCL4Q6XD76 172 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 BCDIN3DQ7Z5W3 292 aaKnown RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 SLC26A11Q86WA9 606 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 RNF130Q86XS8 419 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 GPSM1Q86YR5 675 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 MB21D2Q8IYB1 491 aaPredicted RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 C1orf52Q8N6N3 182 aaKnown RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 TMEM99Q8N816 258 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 LRRC57Q8N9N7 239 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 SNX31Q8N9S9 440 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 CYB561A3Q8NBI2 242 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 RNF149Q8NC42 400 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 TTLQ8NG68 377 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 ENKURQ8TC29 256 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 CCDC107Q8WV48 283 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 GTF2H4Q92759 462 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 CD101Q93033 1021 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 TSACCQ96A04 125 aaPredicted RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 MTBPQ96DY7 904 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 ZNF419Q96HQ0 510 aaPredicted RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 TSSK3Q96PN8 268 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 SLC38A2Q96QD8 506 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 S1PR3Q99500 378 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 NAPGQ99747 312 aaPredicted RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 CCM2Q9BSQ5 444 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 PARD6GQ9BYG4 376 aaPredicted RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 CIPCQ9C0C6 399 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 OR2B2Q9GZK3 357 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 NPFFR1Q9GZQ6 430 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 FAM234AQ9H0X4 552 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 TMEM74BQ9NUR3 256 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 SIX4Q9UIU6 781 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 NAGKQ9UJ70 344 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 DIMT1Q9UNQ2 313 aaKnown RBP5.69□□□□□ -1.5
VPS29-210ENST00000552130 MEMO1Q9Y316 297 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 CHST2Q9Y4C5 530 aa5.69□□□□□ -1.5
VPS29-210ENST00000552130 A0A1W2PPC1 479 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 A0A1W2PPE3 182 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 WDR91A4D1P6 747 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 OR6C70A6NIJ9 312 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 ARHGEF33A8MVX0 844 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 POC1B-GALNT4F8VUJ3 575 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 H7C1Q1 480 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 RAD51BO15315 384 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 SH3BGRLO75368 114 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 BAG4O95429 457 aaKnown RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 PIGRP01833 764 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 UBCP0CG48 685 aaKnown RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 MLNP12872 115 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 ST6GAL1P15907 406 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 LMO1P25800 156 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 MSNP26038 577 aaKnown RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 PDHA2P29803 388 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 UGT1A5P35504 534 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 PIGAP37287 484 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 P2RY2P41231 377 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 TMPOP42166 694 aaKnown RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 TAS2R38P59533 333 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 ERVK-8P63133 956 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 OGDHQ02218 1023 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 LGALS3BPQ08380 585 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 ODF4Q2M2E3 257 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 GLYR1Q49A26 553 aaPredicted RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 DNAL1Q4LDG9 190 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 TTMPQ5BVD1 217 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 OTUD3Q5T2D3 398 aaPredicted RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 C1QL3Q5VWW1 255 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 SLX4IPQ5VYV7 408 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 WDR53Q7Z5U6 358 aaPredicted RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 PRUNE1Q86TP1 453 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 ACOT1Q86TX2 421 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 KMT5CQ86Y97 462 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 MMAAQ8IVH4 418 aaKnown RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 MMD2Q8IY49 270 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 PARP8Q8N3A8 854 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 FGFRL1Q8N441 504 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 NOA1Q8NC60 698 aaKnown RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 NFAM1Q8NET5 270 aaPredicted RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 STXBP6Q8NFX7 210 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 OR1L6Q8NGR2 347 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 OR14A16Q8NHC5 309 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 NANPQ8TBE9 248 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 TMEM19Q96HH6 336 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 ZFYVE19Q96K21 471 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 IL4I1Q96RQ9 567 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 CTRCQ99895 268 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 AGPAT1Q99943 283 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 C7orf50Q9BRJ6 194 aaKnown RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 DUSP16Q9BY84 665 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms