RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CGAP01215 116 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 ALDOAP04075 364 aaKnown RBP12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 FCGR2AP12318 317 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 PPP3CBP16298 524 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 TBXA2RP21731 343 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 PNLIPRP2P54317 469 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 NR1H2P55055 460 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 B3GALT5-AS1P59052 145 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 LTB4RQ15722 352 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 SGO1Q5FBB7 561 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 MROH9Q5TGP6 573 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 RAET1LQ5VY80 246 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 CCDC25Q86WR0 208 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 PTGR2Q8N8N7 351 aaPredicted RBP12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF675Q8TD23 568 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 FBF1Q8TES7 1133 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 FIG4Q92562 907 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 PINK1Q9BXM7 581 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 KLHL4Q9C0H6 718 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 RNF122Q9H9V4 155 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 RNF14Q9UBS8 474 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 UTS2RQ9UKP6 389 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 TMCO1Q9UM00 188 aa12.79□□□□□ -0.36
CHMP1A-210ENST00000551981 ANK3Q12955 4377 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 A0A096LPK6 155 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 SEC14L5O43304 696 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 TSPAN2O60636 221 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 ESRRBO95718 433 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 CT45A8P0DMV1 189 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 CT45A9P0DMV2 189 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 HK1P19367 917 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 LOXP28300 417 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 SERPINB8P50452 374 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 ATP5J2P56134 94 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 CORO7P57737 925 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 RPS3AP61247 264 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 TRA2BP62995 288 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 MRPS25P82663 173 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 DUSP2Q05923 314 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 DMTNQ08495 405 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 TRAF3Q13114 568 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 GANABQ14697 944 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 GGTA1PQ4G0N0 100 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 CT45A2Q5DJT8 189 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF628Q5EBL2 1059 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 ANKRD34AQ69YU3 496 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF704Q6ZNC4 412 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 MILR1Q7Z6M3 343 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 SAMD14Q8IZD0 417 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF610Q8N9Z0 462 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 FNDC9Q8TBE3 224 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 NANOS1Q8WY41 292 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 GFM2Q969S9 779 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 TM4SF18Q96CE8 201 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 PHF21BQ96EK2 531 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 CNRIP1Q96F85 164 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 VSTM2LQ96N03 204 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF681Q96N22 645 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 NAPGQ99747 312 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 STMN4Q9H169 189 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 PTGES2Q9H7Z7 377 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 BRF2Q9HAW0 419 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 FANCFQ9NPI8 374 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 SDHAF3Q9NRP4 125 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 ZNF701Q9NV72 531 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 PCTPQ9UKL6 214 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 OR10H1Q9Y4A9 318 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 USF3Q68DE3 2245 aa12.78□□□□□ -0.36
CHMP1A-210ENST00000551981 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 STX16-NPEPL1H3BU86 382 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 STX16O14662 325 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 TYK2P29597 1187 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 EVI2BP34910 448 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 MAGEA4P43358 317 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 GAS1P54826 345 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 GNG11P61952 73 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 OCRLQ01968 901 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 CAV1Q03135 178 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 GALNT1Q10472 559 aaPredicted RBP12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 PON3Q15166 354 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 EXOC3L2Q2M3D2 409 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 FAM180BQ6P0A1 224 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 SH2D5Q6ZV89 423 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 CCDC116Q8IYX3 515 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 FADS6Q8N9I5 356 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 RNF138Q8WVD3 245 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 SELENOMQ8WWX9 145 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 IGFBPL1Q8WX77 278 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 EFHD2Q96C19 240 aaPredicted RBP12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 GPR78Q96P69 363 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 DSN1Q9H410 356 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 GIMAP4Q9NUV9 329 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 GRHL1Q9NZI5 618 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 SENP1Q9P0U3 644 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 SNX6Q9UNH7 406 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 EMC9Q9Y3B6 208 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 ZNF337Q9Y3M9 751 aa12.77□□□□□ -0.37
CHMP1A-210ENST00000551981 H3BML4 177 aa12.76□□□□□ -0.37
CHMP1A-210ENST00000551981 SCO2O43819 266 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms