RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 KBTBD2Q8IY47 623 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 OR1N1Q8NGS0 311 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 OR2T29Q8NH02 315 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 OR8K3Q8NH51 312 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 C16orf52Q8NHV5 167 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 SLC2A12Q8TD20 617 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 TSLPQ969D9 159 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 C7orf34Q96L11 122 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 SDF2Q99470 211 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 EPYCQ99645 322 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 YIPF4Q9BSR8 244 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 CRB3Q9BUF7 120 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 RUBCNLQ9H714 662 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 REEP1Q9H902 201 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 PNO1Q9NRX1 252 aaKnown RBP13.22□□□□□ -0.29
LETMD1-229ENST00000551261 C15orf41Q9Y2V0 281 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 FAM32AQ9Y421 112 aaKnown RBP13.22□□□□□ -0.29
LETMD1-229ENST00000551261 LRRC42Q9Y546 428 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 PCDHGA10Q9Y5H3 936 aa13.22□□□□□ -0.29
LETMD1-229ENST00000551261 PRAMEF27A3QJZ7 478 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 AGAP5A6NIR3 686 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 RASAL1O95294 804 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 DLGAP3O95886 979 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 OPN1SWP03999 348 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 FESP07332 822 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 ACADSP16219 412 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 ZNF23P17027 643 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 RHCEP18577 417 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 DRD5P21918 477 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 RPS4Y1P22090 263 aaKnown RBP13.21□□□□□ -0.29
LETMD1-229ENST00000551261 CD82P27701 267 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 SSTR4P31391 388 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 IFNA8P32881 189 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 PIGAP37287 484 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 RPS26P11Q5JNZ5 115 aaPredicted RBP13.21□□□□□ -0.29
LETMD1-229ENST00000551261 HES3Q5TGS1 186 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 HLA-DQA1Q5Y7H0 255 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 TYW3Q6IPR3 259 aaKnown RBP13.21□□□□□ -0.29
LETMD1-229ENST00000551261 FAM198BQ6UWH4 519 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 DGAT2L6Q6ZPD8 337 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 ZBTB49Q6ZSB9 765 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 ANKRD37Q7Z713 158 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 VTCN1Q7Z7D3 282 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 TMPRSS12Q86WS5 348 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 CMIPQ8IY22 773 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 OR5K1Q8NHB7 308 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 MR1Q95460 341 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 ZNF300Q96RE9 604 aaPredicted RBP13.21□□□□□ -0.29
LETMD1-229ENST00000551261 LPAR4Q99677 370 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 SEMA4CQ9C0C4 833 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 HOXD1Q9GZZ0 328 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 GABARAPL1Q9H0R8 117 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 C3orf18Q9UK00 162 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 GPR55Q9Y2T6 319 aaPredicted RBP13.21□□□□□ -0.29
LETMD1-229ENST00000551261 OR10H1Q9Y4A9 318 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 ENPP4Q9Y6X5 453 aa13.21□□□□□ -0.29
LETMD1-229ENST00000551261 SPTBP11277 2137 aa13.21□□□□□ -0.3
LETMD1-229ENST00000551261 A0A1W2PQ72 361 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 ARRDC5A6NEK1 342 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 TMEM229AB2RXF0 380 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 TO15178 435 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 E2F6O75461 281 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 STK17BO94768 372 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 KCNK2O95069 426 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 DDAH2O95865 285 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 FPR1P21462 350 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 DNAJA1P31689 397 aaKnown RBP13.2□□□□□ -0.3
LETMD1-229ENST00000551261 GABRA3P34903 492 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 VLDLRP98155 873 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 CHRNEQ04844 493 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 DECR1Q16698 335 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 RFX4Q33E94 735 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 ZNF311Q5JNZ3 666 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 LPCAT4Q643R3 524 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 SHQ1Q6PI26 577 aaKnown RBP13.2□□□□□ -0.3
LETMD1-229ENST00000551261 C6orf15Q6UXA7 325 aaPredicted RBP13.2□□□□□ -0.3
LETMD1-229ENST00000551261 AMIGO2Q86SJ2 522 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 GALNT10Q86SR1 603 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 LINC00471Q8N535 108 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 ESX1Q8N693 406 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 B3GNT7Q8NFL0 401 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 OR2Y1Q8NGV0 311 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 OR52P1PQ8NH57 321 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 FAM110BQ8TC76 370 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 ZNF721Q8TF20 911 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 APOBEC4Q8WW27 367 aaKnown RBP13.2□□□□□ -0.3
LETMD1-229ENST00000551261 TP53INP1Q96A56 240 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 HSPBAP1Q96EW2 488 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 VMP1Q96GC9 406 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 LCORQ96JN0 433 aaPredicted RBP13.2□□□□□ -0.3
LETMD1-229ENST00000551261 PIP5K1AQ99755 562 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 CIB1Q99828 191 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 RBM4BQ9BQ04 359 aaKnown RBP13.2□□□□□ -0.3
LETMD1-229ENST00000551261 TACO1Q9BSH4 297 aaKnown RBP13.2□□□□□ -0.3
LETMD1-229ENST00000551261 RBM4Q9BWF3 364 aaKnown RBP13.2□□□□□ -0.3
LETMD1-229ENST00000551261 OR8D2Q9GZM6 311 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 SEMA6AQ9H2E6 1030 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 ANKRA2Q9H9E1 313 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 HHATLQ9HCP6 504 aa13.2□□□□□ -0.3
LETMD1-229ENST00000551261 USE1Q9NZ43 259 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms