RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 CNEP1R1Q8N9A8 125 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 SIMC1Q8NDZ2 872 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 METTL6Q8TCB7 284 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 KAT2AQ92830 837 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 EXOSC8Q96B26 276 aaKnown RBP20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 FAM111AQ96PZ2 611 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 CDC42EP4Q9H3Q1 356 aaKnown RBP20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 FBXL2Q9UKC9 423 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 TRIM49D1C9J1S8 452 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 LINC01387J3KSC0 135 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 MANBAO00462 879 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 PPP6CO00743 305 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 TSPAN2O60636 221 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 IL3P08700 152 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 SNRPAP09012 282 aaKnown RBP20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 CT45A8P0DMV1 189 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 CT45A9P0DMV2 189 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 TSPAN8P19075 237 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 DUSP2Q05923 314 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 FGFBP1Q14512 234 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 CT45A2Q5DJT8 189 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 OR5M10Q6IEU7 315 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 SLC44A2Q8IWA5 706 aaPredicted RBP20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 MTBPQ96DY7 904 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 BBS4Q96RK4 519 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 HBEGFQ99075 208 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 PTGES2Q9H7Z7 377 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 ZNF395Q9H8N7 513 aaPredicted RBP20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 ELOVL5Q9NYP7 299 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 HEY2Q9UBP5 337 aa20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 MRTO4Q9UKD2 239 aaKnown RBP20.9■□□□□ 0.94
SMARCD1-209ENST00000550477 ABCA2Q9BZC7 2435 aa20.89■□□□□ 0.94
SMARCD1-209ENST00000550477 A0A1W2PNV4 684 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 SLC22A20A6NK97 555 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 HCRTR2O43614 444 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 PLOD3O60568 738 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 SMPD2O60906 423 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 COQ9O75208 318 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 FPR1P21462 350 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 CLDN18P56856 261 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 GPRIN3Q6ZVF9 776 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 OR9A2Q8NGT5 310 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 FOLH1BQ9HBA9 442 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 SLC35C2Q9NQQ7 365 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 STOML1Q9UBI4 398 aa20.89■□□□□ 0.93
SMARCD1-209ENST00000550477 FLNAP21333 2647 aaKnown RBP20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 A0A087WUV0 522 aaPredicted RBP20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 A0A1B0GTL3 188 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 ZIC3O60481 467 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 TNFSF13O75888 250 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 CD79BP40259 229 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 KCNJ5P48544 419 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 CORO7P57737 925 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 GANABQ14697 944 aaKnown RBP20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 CLEC9AQ6UXN8 241 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 LCA5Q86VQ0 697 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 UBQLNLQ8IYU4 475 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 LRRC75A-AS1Q8N1F1 130 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 IFT81Q8WYA0 676 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 PGM2Q96G03 612 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 VSTM2LQ96N03 204 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 ZNF382Q96SR6 550 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 FMO2Q99518 471 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 PIP5K1AQ99755 562 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 MED18Q9BUE0 208 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 G6PC3Q9BUM1 346 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 TESMINQ9Y4I5 508 aa20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 NIPBLQ6KC79 2804 aaeCLIP20.88■□□□□ 0.93
SMARCD1-209ENST00000550477 ZNF469Q96JG9 3925 aaPredicted RBP20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 UQCRHLA0A096LP55 91 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 SLITRK5O94991 958 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 TGM6O95932 706 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 TCEA1P23193 301 aaKnown RBP20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 EVI2BP34910 448 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 MC3RP41968 323 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 PSMD4P55036 377 aaKnown RBP20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 RPS3AP61247 264 aaKnown RBP20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 FAM27E3Q08E93 113 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 ZNHIT3Q15649 155 aaPredicted RBP20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 CYP27C1Q4G0S4 372 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 ZNF678Q5SXM1 525 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 RAET1LQ5VY80 246 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 PLXDC2Q6UX71 529 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 SLC22A9Q8IVM8 553 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 C16orf78Q8WTQ4 265 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 EFHD2Q96C19 240 aaPredicted RBP20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 ZNF225Q9UK10 706 aa20.87■□□□□ 0.93
SMARCD1-209ENST00000550477 CTIFO43310 598 aaKnown RBP20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 TNFRSF21O75509 655 aa20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 ENO1P06733 434 aaKnown RBP20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 POU2F1P14859 743 aa20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 HK1P19367 917 aa20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 TIA1P31483 386 aaKnown RBP eCLIP20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 ZNF155Q12901 538 aaPredicted RBP20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 DECR1Q16698 335 aa20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 SH2D4BQ5SQS7 431 aa20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 CNPY4Q8N129 248 aa20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 DCAKDQ8WVC6 231 aa20.86■□□□□ 0.93
SMARCD1-209ENST00000550477 STARD4Q96DR4 205 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms