RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ZNF443Q9Y2A4 671 aaPredicted RBP8.38□□□□□ -1.07
TMEM116-209ENST00000550020 TMEM5Q9Y2B1 443 aa8.38□□□□□ -1.07
TMEM116-209ENST00000550020 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 TMEM129A0AVI4 362 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 TRAPPC13A5PLN9 417 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 WASHC1A8K0Z3 465 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 C4orf51C9J302 202 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 RFXAPO00287 272 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 ZNF217O75362 1048 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 PRKRAO75569 313 aaKnown RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 UBXN7O94888 489 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 SNX4O95219 450 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 APOA1P02647 267 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 STATHP02808 62 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 TSPAN19P0C672 248 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 BMP4P12644 408 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 GABRG2P18507 467 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 NT5EP21589 574 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 CDH3P22223 829 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 RORCP51449 518 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 BCAP31P51572 246 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 MLLT10P55197 1068 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 RAB38P57729 211 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 UBE2IP63279 158 aaKnown RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 FOXD4Q12950 439 aaPredicted RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 ATP1A4Q13733 1029 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 OXA1LQ15070 435 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 ANKDD1AQ495B1 522 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 SYT14P1Q58G82 188 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 TPRG1LQ5T0D9 272 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 C6orf132Q5T0Z8 1188 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 FCRL6Q6DN72 434 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 TAF8Q7Z7C8 310 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 CSNK1A1LQ8N752 337 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 COX18Q8N8Q8 333 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 OR7G2Q8NG99 324 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 OR52L1Q8NGH7 329 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 ZCCHC10Q8TBK6 192 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 JPH3Q8WXH2 748 aaPredicted RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 FAM3CQ92520 227 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 SLC9A6Q92581 669 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 DIO2Q92813 273 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 KAT2AQ92830 837 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 CDS1Q92903 461 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 COL26A1Q96A83 441 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 GIMAP5Q96F15 307 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 SLC35A4Q96G79 324 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 SLC41A3Q96GZ6 507 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 MSLNLQ96KJ4 702 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 LRR1Q96L50 414 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 HS6ST2Q96MM7 605 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 ZNF582Q96NG8 517 aaPredicted RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 TAPBPLQ9BX59 468 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 C6orf62Q9GZU0 229 aaPredicted RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 NUAK2Q9H093 628 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 SAP130Q9H0E3 1048 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 SP140LQ9H930 580 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 ZBTB20Q9HC78 741 aaPredicted RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 CPNE5Q9HCH3 593 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 MAN2C1Q9NTJ4 1040 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 HRASLS2Q9NWW9 162 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 NDUFB11Q9NX14 153 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 RHBDL2Q9NX52 303 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 DNAJC27Q9NZQ0 273 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 TESQ9UGI8 421 aaKnown RBP8.37□□□□□ -1.07
TMEM116-209ENST00000550020 CD207Q9UJ71 328 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 CLCA2Q9UQC9 943 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 CORINQ9Y5Q5 1042 aa8.37□□□□□ -1.07
TMEM116-209ENST00000550020 A0A087WUU8 490 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 SPTY2D1-AS1A0A0U1RR47 76 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 FUOMA2VDF0 154 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 CPSF4LA6NMK7 179 aaKnown RBP8.36□□□□□ -1.07
TMEM116-209ENST00000550020 KDM4EB2RXH2 506 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-209ENST00000550020 FAM227AF5H4B4 570 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 H0YGG7 62 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 STK25O00506 426 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 ARHGAP33O14559 1287 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 SCAMP1O15126 338 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 KIAA0513O60268 411 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 SRPX2O60687 465 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-209ENST00000550020 TPST2O60704 377 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 GALR3O60755 368 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-209ENST00000550020 SEMA7AO75326 666 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 UPK1BO75841 260 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 RCBTB2O95199 551 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 EML2O95834 649 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 EIF2S1P05198 315 aaKnown RBP8.36□□□□□ -1.07
TMEM116-209ENST00000550020 SLC35E2P0CK97 266 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 ALPPL2P10696 532 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 HOXB3P14651 431 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-209ENST00000550020 ETV6P41212 452 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 AVPR1BP47901 424 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 MTNR1AP48039 350 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 PDX1P52945 283 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 PSMD4P55036 377 aaKnown RBP8.36□□□□□ -1.07
TMEM116-209ENST00000550020 WNT4P56705 351 aa8.36□□□□□ -1.07
TMEM116-209ENST00000550020 ARF3P61204 181 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-209ENST00000550020 POU6F2P78424 691 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms