RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 SLC22A20A6NK97 555 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 SMAD7O15105 426 aaKnown RBP13.92□□□□□ -0.18
RAB5C-205ENST00000550013 ABCB7O75027 752 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 OR4F21O95013 312 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 OTCP00480 354 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 IL3P08700 152 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 CHN1P15882 459 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 IL12BP29460 328 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 CCKARP32238 428 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 CD79BP40259 229 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 TRA2BP62995 288 aaKnown RBP13.92□□□□□ -0.18
RAB5C-205ENST00000550013 SIRPAP78324 504 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 EFR3AQ14156 821 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 ZNF474Q6S9Z5 364 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-205ENST00000550013 PRIMA1Q86XR5 153 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 LRRC75A-AS1Q8N1F1 130 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 OR4K17Q8NGC6 315 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 OR4N2Q8NGD1 307 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 FIG4Q92562 907 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 EXOSC8Q96B26 276 aaKnown RBP13.92□□□□□ -0.18
RAB5C-205ENST00000550013 EFHD2Q96C19 240 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-205ENST00000550013 PGM2Q96G03 612 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 PIGQQ9BRB3 760 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 FOLH1BQ9HBA9 442 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 SNX6Q9UNH7 406 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 MRPS18CQ9Y3D5 142 aaKnown RBP13.92□□□□□ -0.18
RAB5C-205ENST00000550013 FBN3Q75N90 2809 aa13.92□□□□□ -0.18
RAB5C-205ENST00000550013 HIVEP2P31629 2446 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 A8MT66 165 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 H0YC42 278 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 MANBAO00462 879 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 SCO2O43819 266 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 CRHP06850 196 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 SBK3P0C264 359 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 CRYGSP22914 178 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 PHBP35232 272 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 KRT20P35900 424 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 MC3RP41968 323 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 KIR2DL2P43627 348 aaPredicted RBP13.91□□□□□ -0.18
RAB5C-205ENST00000550013 TPD52P55327 224 aaPredicted RBP13.91□□□□□ -0.18
RAB5C-205ENST00000550013 CLDN15P56746 228 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 RAE1P78406 368 aaKnown RBP13.91□□□□□ -0.18
RAB5C-205ENST00000550013 BCL2A1Q16548 175 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 ACKR1Q16570 336 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 ERCC6LQ2NKX8 1250 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 TSNAXIP1Q2TAA8 658 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 CHMP1BQ7LBR1 199 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 ZNF550Q7Z398 422 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 SLC44A2Q8IWA5 706 aaPredicted RBP13.91□□□□□ -0.18
RAB5C-205ENST00000550013 NUDT8Q8WV74 236 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 PIGTQ969N2 578 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 PERPQ96FX8 193 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 HS3ST6Q96QI5 342 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 MED18Q9BUE0 208 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 DSN1Q9H410 356 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 VPS29Q9UBQ0 182 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 TRPS1Q9UHF7 1281 aa13.91□□□□□ -0.18
RAB5C-205ENST00000550013 TRIM64A6NGJ6 449 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 TRIM64BA6NI03 449 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 FAM171A2A8MVW0 826 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 KIAA1324LA8MWY0 1029 aaPredicted RBP13.9□□□□□ -0.18
RAB5C-205ENST00000550013 BCAS2O75934 225 aaPredicted RBP13.9□□□□□ -0.18
RAB5C-205ENST00000550013 INHBAP08476 426 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 PEPDP12955 493 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 PCSK6P29122 969 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 UGT2B10P36537 528 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 SUCLG1P53597 346 aaKnown RBP13.9□□□□□ -0.18
RAB5C-205ENST00000550013 PNLIPRP2P54317 469 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 DSCR4P56555 118 aaPredicted RBP13.9□□□□□ -0.18
RAB5C-205ENST00000550013 OR2A2Q6IF42 318 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 YTHDF3Q7Z739 585 aaKnown RBP13.9□□□□□ -0.18
RAB5C-205ENST00000550013 CDYL2Q8N8U2 506 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 GBP7Q8N8V2 638 aaPredicted RBP13.9□□□□□ -0.18
RAB5C-205ENST00000550013 FADS6Q8N9I5 356 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 OR7G2Q8NG99 324 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 OR5M1Q8NGP8 315 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 ERP27Q96DN0 273 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 DTNBP1Q96EV8 351 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 MARK4Q96L34 752 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 CCL19Q99731 98 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 MRPL57Q9BQC6 102 aaKnown RBP13.9□□□□□ -0.18
RAB5C-205ENST00000550013 C1QTNF3Q9BXJ4 246 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 MRPL46Q9H2W6 279 aaKnown RBP13.9□□□□□ -0.18
RAB5C-205ENST00000550013 NMRK1Q9NWW6 199 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 ZNF226Q9NYT6 803 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 FLRT3Q9NZU0 649 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 PPP4R1LQ9P1A2 415 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 MCM8Q9UJA3 840 aa13.9□□□□□ -0.18
RAB5C-205ENST00000550013 SEC14L5O43304 696 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 PCDH7O60245 1069 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 COL6A2P12110 1019 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 POU2F1P14859 743 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 HK1P19367 917 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 LOXP28300 417 aaPredicted RBP13.89□□□□□ -0.19
RAB5C-205ENST00000550013 CASQ1P31415 396 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 EVI2BP34910 448 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 HSD17B3P37058 310 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 PCYT1AP49585 367 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 CLCQ05315 142 aa13.89□□□□□ -0.19
RAB5C-205ENST00000550013 ZNF155Q12901 538 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms