RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 RHAGQ02094 409 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 ST3GAL3Q11203 375 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF141Q15928 474 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF311Q5JNZ3 666 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 TCTE1Q5JU00 501 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 TMEM31Q5JXX7 168 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 C6orf132Q5T0Z8 1188 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 KMT5CQ86Y97 462 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 CMIPQ8IY22 773 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF540Q8NDQ6 660 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 OR52P1PQ8NH57 321 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 MVB12AQ96EY5 273 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF426Q9BUY5 554 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 NAA50Q9GZZ1 169 aaKnown RBP9.31□□□□□ -0.92
RAB5B-206ENST00000549505 FAM60AQ9NP50 221 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 TESQ9UGI8 421 aaKnown RBP9.31□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF223Q9UK11 482 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-206ENST00000549505 NDRG2Q9UN36 371 aaKnown RBP9.31□□□□□ -0.92
RAB5B-206ENST00000549505 MN1Q10571 1320 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-206ENST00000549505 NUMA1Q14980 2115 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 HTR3EA5X5Y0 456 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 M0R082 166 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 CBX7O95931 251 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 NID1P14543 1247 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 PNLIPP16233 465 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 MMP11P24347 488 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 FUT7Q11130 342 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 AQP6Q13520 282 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 SMN1Q16637 294 aaKnown RBP9.31□□□□□ -0.92
RAB5B-206ENST00000549505 DUSP5Q16690 384 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 TMEM44Q2T9K0 475 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 MBOAT2Q6ZWT7 520 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 SLC46A3Q7Z3Q1 461 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 PRSS42Q7Z5A4 293 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 SLC16A11Q8NCK7 471 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 ADAMTS15Q8TE58 950 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 ACOT11Q8WXI4 607 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-206ENST00000549505 COPS4Q9BT78 406 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 FNDC11Q9BVV2 318 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 ITPAQ9BY32 194 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 FGF20Q9NP95 211 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-206ENST00000549505 FBXO8Q9NRD0 319 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 C14orf105Q9NVL8 296 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 TRPC4Q9UBN4 977 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 PCDHGA3Q9Y5H0 932 aa9.31□□□□□ -0.92
RAB5B-206ENST00000549505 LAMA2P24043 3122 aaKnown RBP9.31□□□□□ -0.92
RAB5B-206ENST00000549505 PRRC2BQ5JSZ5 2229 aaKnown RBP9.3□□□□□ -0.92
RAB5B-206ENST00000549505 IRGMA1A4Y4 181 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 MAGEB3O15480 346 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 ONECUT2O95948 504 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 THY1P04216 161 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 ALOX5P09917 674 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 ADH7P40394 386 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 ST13P50502 369 aaKnown RBP9.3□□□□□ -0.92
RAB5B-206ENST00000549505 CTBP2P56545 445 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 HSD17B7P56937 341 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 HNRNPKP61978 463 aaKnown RBP eCLIP9.3□□□□□ -0.921e-8■■■□□ 15.4
RAB5B-206ENST00000549505 TUBA1BP68363 451 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 OLR1P78380 273 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 C14orf28Q4W4Y0 310 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 PLAG1Q6DJT9 500 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 LINC00114Q6XXX2 140 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF836Q6ZNA1 936 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 TUBA1AQ71U36 451 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 UBALD2Q8IYN6 164 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 DYNC2LI1Q8TCX1 351 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 UBE2FQ969M7 185 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 CCNL2Q96S94 520 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-206ENST00000549505 PLGRKTQ9HBL7 147 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 CLN6Q9NWW5 311 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 IL20Q9NYY1 176 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 OSGIN1Q9UJX0 560 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 TP53BP1Q12888 1972 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-206ENST00000549505 A0A087WUU8 490 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 KDM4EB2RXH2 506 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-206ENST00000549505 M0R3H8 397 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 NOL3O60936 208 aaKnown RBP9.3□□□□□ -0.92
RAB5B-206ENST00000549505 STX11O75558 287 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 CLPSP04118 112 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 PROS1P07225 676 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 ALDH4A1P30038 563 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 CNR2P34972 360 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 DCTN2Q13561 401 aaKnown RBP9.3□□□□□ -0.92
RAB5B-206ENST00000549505 GANABQ14697 944 aaKnown RBP9.3□□□□□ -0.92
RAB5B-206ENST00000549505 TCEA2Q15560 299 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF829Q3KNS6 432 aaPredicted RBP9.3□□□□□ -0.92
RAB5B-206ENST00000549505 FGD3Q5JSP0 725 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 CHRDL2Q6WN34 429 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 KANSL1Q7Z3B3 1105 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 NANOGNBQ7Z5D8 188 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 P3H2Q8IVL5 708 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 PEX5LQ8IYB4 626 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 OR4K5Q8NGD3 323 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 OR52J3Q8NH60 311 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 PRSS27Q9BQR3 290 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 KLHL28Q9NXS3 571 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 EML5Q05BV3 1969 aa9.3□□□□□ -0.92
RAB5B-206ENST00000549505 CDHR4A6H8M9 788 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 CCDC85CA6NKD9 419 aa9.29□□□□□ -0.92
RAB5B-206ENST00000549505 TOX3O15405 576 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms