RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MS4A6EQ96DS6 147 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 METTL2AQ96IZ6 378 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF582Q96NG8 517 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC38A2Q96QD8 506 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 YIPF2Q9BWQ6 316 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 C3orf14Q9HBI5 128 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 ATP13A2Q9NQ11 1180 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 WSB2Q9NYS7 404 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 HCN2Q9UL51 889 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC7A7Q9UM01 511 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 WDR45Q9Y484 360 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 PCDHGA3Q9Y5H0 932 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 ASXL3Q9C0F0 2248 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 ARID1AO14497 2285 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 MDC1Q14676 2089 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 SAGE2PA6NJ88 616 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 MPZL2O60487 215 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 TSC22D2O75157 780 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 PRG2P13727 222 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 SMSP52788 366 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 ERVK-21P61565 698 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 HTRA4P83105 476 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 REEP5Q00765 189 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 IRF3Q14653 427 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 PRRT3Q5FWE3 981 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 AGAP7PQ5VUJ5 663 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 ATP6V1C2Q8NEY4 427 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 ANKK1Q8NFD2 765 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 EPHX3Q9H6B9 360 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 TMEM74BQ9NUR3 256 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 FBXO34Q9NWN3 711 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 ICKQ9UPZ9 632 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 DENND4CQ5VZ89 1909 aa12.83□□□□□ -0.36
PRPF40B-209ENST00000548825 SERTM1A2A2V5 107 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 SLITRK5O94991 958 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 ACADMP11310 421 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 APEX1P27695 318 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 CMPK1P30085 196 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 ILKQ13418 452 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 GXYLT1Q4G148 440 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 ARL9Q6T311 187 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 CPOQ8IVL8 374 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 CADM2Q8N3J6 435 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 OR8D4Q8NGM9 314 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 C9orf43Q8TAL5 461 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 PLCXD1Q9NUJ7 323 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 TXNL4BQ9NX01 149 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 OR6C74A6NCV1 312 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 PSMD9O00233 223 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 PSKH1P11801 424 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 GCGRP47871 477 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 PCBP4P57723 403 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 SMIM11AP58511 58 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF45Q02386 682 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 DPTQ07507 201 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC3A1Q07837 685 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 ENTPD8Q5MY95 495 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF770Q6IQ21 691 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 ABHD17CQ6PCB6 329 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 PAMR1Q6UXH9 720 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 ATCAYQ86WG3 371 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 AMIGO1Q86WK6 493 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 ENKURQ8TC29 256 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 TM9SF4Q92544 642 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 FAM83CQ9BQN1 747 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 HDHD2Q9H0R4 259 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 DDX31Q9H8H2 851 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC27A6Q9Y2P4 619 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 MAN2B1O00754 1011 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 RAB36O95755 333 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 TRIM23P36406 574 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 EIF4HQ15056 248 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 IDNKQ5T6J7 187 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 FAM27D1Q5T7N8 215 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 KIF18BQ86Y91 864 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 A4GALTQ9NPC4 353 aa12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 NUFIP1Q9UHK0 495 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-209ENST00000548825 RTTNQ86VV8 2226 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC30A4O14863 429 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 IDH3BO43837 385 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 CEACAM5P06731 702 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 HOXB2P14652 356 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 ERV3-1Q14264 604 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 RPE65Q16518 533 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF181Q2M3W8 571 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 SLX4IPQ5VYV7 408 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 SDE2Q6IQ49 451 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 BHLHB9Q6PI77 547 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF517Q6ZMY9 492 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 KIAA0907Q7Z7F0 614 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 RASGRP3Q8IV61 690 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 OR7G2Q8NG99 324 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 PIGXQ8TBF5 258 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 DCLRE1CQ96SD1 692 aaKnown RBP12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 SPATA5L1Q9BVQ7 753 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 PCBD2Q9H0N5 130 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 NEK6Q9HC98 313 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 NLGN3Q9NZ94 848 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 ANKMY1Q9P2S6 941 aa12.81□□□□□ -0.36
PRPF40B-209ENST00000548825 STUB1Q9UNE7 303 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms