RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 IL20Q9NYY1 176 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 PRKAG2Q9UGJ0 569 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 H7BY64 318 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 CCL16O15467 120 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 OR1F1O43749 312 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 LZTS3O60299 673 aaPredicted RBP9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 FGF19O95750 216 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 CRYZL1O95825 349 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 C6P13671 934 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 SLC6A1P30531 599 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 CA8P35219 290 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 PPM1AP35813 382 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 MTNR1BP49286 362 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 RNF144AP50876 292 aaPredicted RBP9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 ARFIP1P53367 373 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 CTBP2P56545 445 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 TEAD2Q15562 447 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 ZNF77Q15935 545 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 ZNF57Q68EA5 555 aaPredicted RBP9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 SIGIRRQ6IA17 410 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 TMEM91Q6ZNR0 172 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 AMZ2Q86W34 360 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 LRRC28Q86X40 367 aaPredicted RBP9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 MEX3DQ86XN8 651 aaKnown RBP9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 GHDCQ8N2G8 530 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 FAM109AQ8N4B1 249 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 ZNF366Q8N895 744 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 AMER3Q8N944 861 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 TP53I13Q8NBR0 393 aaPredicted RBP9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 KREMEN2Q8NCW0 462 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 OR4M1Q8NGD0 313 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 OR5M3Q8NGP4 307 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 OR4Q3Q8NH05 313 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 DIO2Q92813 273 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 OTUB2Q96DC9 234 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 FAM46AQ96IP4 442 aaKnown RBP9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 PRAP1Q96NZ9 151 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 BBS4Q96RK4 519 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 MKRN2Q9H000 416 aaKnown RBP9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 SEMA4GQ9NTN9 838 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 CNIH4Q9P003 139 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 SLC13A4Q9UKG4 626 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 HSPB11Q9Y547 144 aa9.27□□□□□ -0.93
SMARCD1-205ENST00000548573 LRRK1Q38SD2 2015 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 J3QRE1 110 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 MAN2B1O00754 1011 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 AKR7A2O43488 359 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 PLOD3O60568 738 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 HMGN2P05204 90 aaKnown RBP9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 ELK1P19419 428 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 TRIM23P36406 574 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 PRKAG1P54619 331 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 EPHA5P54756 1037 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 ST8SIA6P61647 398 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 MAP4K2Q12851 820 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 LASP1Q14847 261 aaKnown RBP9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 DECR1Q16698 335 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 UAP1L1Q3KQV9 507 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 TMEM35AQ53FP2 167 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 ZNF311Q5JNZ3 666 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 CEP78Q5JTW2 689 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 CLEC12AQ5QGZ9 265 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 ZNF697Q5TEC3 545 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 SLC30A6Q6NXT4 461 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 ZNF322Q6U7Q0 402 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 ZNF782Q6ZMW2 699 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 SLC37A3Q8NCC5 494 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 OR56A1Q8NGH5 318 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 CD99L2Q8TCZ2 262 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 ACOT11Q8WXI4 607 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 KCTD12Q96CX2 325 aaKnown RBP9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 TCEAL4Q96EI5 215 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 WACQ9BTA9 647 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 SLC28A3Q9HAS3 691 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 GALNT9Q9HCQ5 603 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 CYSLTR2Q9NS75 346 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 HCFC1R1Q9NWW0 138 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 B3GNT2Q9NY97 397 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 CALML5Q9NZT1 146 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 EXTL2Q9UBQ6 330 aa9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 PCYT1BQ9Y5K3 369 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-205ENST00000548573 C2orf92A0A1B0GVN3 265 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 A0A1W2PPV9 198 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 LRIT2A6NDA9 550 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 CD8B2A6NJW9 211 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 GTPBP1O00178 669 aaKnown RBP9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 KLF4O43474 513 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 MOSPD3O75425 235 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 RGS9O75916 674 aaPredicted RBP9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 HMGN1P05114 100 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 ADH1AP07327 375 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 CD8BP10966 210 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 GNSP15586 552 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 PSMB5P28074 263 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 EVI2BP34910 448 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 SSR2P43308 183 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 RFX3P48380 749 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 AGFG1P52594 562 aaKnown RBP9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 METAP1P53582 386 aa9.25□□□□□ -0.93
SMARCD1-205ENST00000548573 SNRPD2P62316 118 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms