RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NFE2L1Q14494 772 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ZBTB37Q5TC79 503 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ZNF322Q6U7Q0 402 aaPredicted RBP8.22□□□□□ -1.09
TDP1-204ENST00000545686 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
TDP1-204ENST00000545686 LHFPL3Q86UP9 236 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ZFP41Q8N8Y5 198 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 DIO2Q92813 273 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 RFT1Q96AA3 541 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 IL17FQ96PD4 163 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 FAIM2Q9BWQ8 316 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 HDHD5Q9BXW7 423 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.22□□□□□ -1.09
TDP1-204ENST00000545686 RANBP3Q9H6Z4 567 aaPredicted RBP8.22□□□□□ -1.09
TDP1-204ENST00000545686 TBC1D17Q9HA65 648 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 KCNK12Q9HB15 430 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 GALNT9Q9HCQ5 603 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 SPHK2Q9NRA0 654 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 MARK1Q9P0L2 795 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 C5AR2Q9P296 337 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 EXTL2Q9UBQ6 330 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 SRRDQ9UH36 339 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 TAC3Q9UHF0 121 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ING4Q9UNL4 249 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 ITM2BQ9Y287 266 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 NCKAP1Q9Y2A7 1128 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 AUP1Q9Y679 476 aa8.22□□□□□ -1.09
TDP1-204ENST00000545686 LINC00862A6NCI5 91 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 NRG2O14511 850 aaPredicted RBP8.21□□□□□ -1.09
TDP1-204ENST00000545686 CHP2O43745 196 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 PLOD3O60568 738 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 LILRB3O75022 631 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 POP7O75817 140 aaKnown RBP8.21□□□□□ -1.09
TDP1-204ENST00000545686 NCR1O76036 304 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 DHFRP00374 187 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 GJA1P17302 382 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 SYN1P17600 705 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 ELK1P19419 428 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 GPR1P46091 355 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 TAS2R38P59533 333 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 CSTF1Q05048 431 aaKnown RBP8.21□□□□□ -1.09
TDP1-204ENST00000545686 GPR176Q14439 515 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 TRAM1Q15629 374 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 DECR1Q16698 335 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 PGGHGQ32M88 737 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 RAET1GQ6H3X3 334 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 ANKRD54Q6NXT1 300 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 GET4Q7L5D6 327 aaPredicted RBP8.21□□□□□ -1.09
TDP1-204ENST00000545686 SHFQ7M4L6 423 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 SZRD1Q7Z422 152 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 GID4Q8IVV7 300 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 TOR1AIP2Q8NFQ8 470 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 OR56A1Q8NGH5 318 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 CXorf40AQ8TE69 158 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 CYB5D2Q8WUJ1 264 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 SPRYD4Q8WW59 207 aaPredicted RBP8.21□□□□□ -1.09
TDP1-204ENST00000545686 ACOT11Q8WXI4 607 aaPredicted RBP8.21□□□□□ -1.09
TDP1-204ENST00000545686 GFM1Q96RP9 751 aaKnown RBP8.21□□□□□ -1.09
TDP1-204ENST00000545686 WACQ9BTA9 647 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 PRR14Q9BWN1 585 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 HDHD2Q9H0R4 259 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 SLC35C2Q9NQQ7 365 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 IL20Q9NYY1 176 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 CALML5Q9NZT1 146 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 TEKT2Q9UIF3 430 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 ELF5Q9UKW6 265 aaPredicted RBP8.21□□□□□ -1.09
TDP1-204ENST00000545686 CCL26Q9Y258 94 aa8.21□□□□□ -1.09
TDP1-204ENST00000545686 TEX51A0A1B0GUA7 166 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 LEUTXA8MZ59 168 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 J3QRE1 110 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 GTPBP1O00178 669 aaKnown RBP8.21□□□□□ -1.1
TDP1-204ENST00000545686 SPINT1O43278 529 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 TGM5O43548 720 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 RNF13O43567 381 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 HRO43593 1189 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 CLEC3AO75596 197 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 HMGN1P05114 100 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 STOMP27105 288 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 AGFG1P52594 562 aaKnown RBP8.21□□□□□ -1.1
TDP1-204ENST00000545686 CTBP2P56545 445 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 SNRPD2P62316 118 aaKnown RBP8.21□□□□□ -1.1
TDP1-204ENST00000545686 LSM11P83369 360 aaKnown RBP eCLIP8.21□□□□□ -1.1
TDP1-204ENST00000545686 MADCAM1Q13477 382 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 ZNF697Q5TEC3 545 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 FAM46CQ5VWP2 391 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 OR4C11Q6IEV9 310 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 TMEM91Q6ZNR0 172 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 RRM2BQ7LG56 351 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 ABI3BPQ7Z7G0 1075 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 C11orf96Q7Z7L8 435 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 OAFQ86UD1 273 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 C11orf74Q86VG3 221 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 LRRC17Q8N6Y2 441 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 OR4F15Q8NGB8 312 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 OR5AR1Q8NGP9 310 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 OR4Q3Q8NH05 313 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 OR5K2Q8NHB8 316 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 PXYLP1Q8TE99 480 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 OTUB1Q96FW1 271 aaPredicted RBP8.21□□□□□ -1.1
TDP1-204ENST00000545686 SCMH1Q96GD3 660 aa8.21□□□□□ -1.1
TDP1-204ENST00000545686 SCLYQ96I15 445 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms