RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 WNK1Q9H4A3 2382 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 EIF3HO15372 352 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 SS18L1O75177 396 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 GCM2O75603 506 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 TGFB1P01137 390 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 ALDOAP04075 364 aaKnown RBP13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 ENO2P09104 434 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 ARL4CP56559 192 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 MFSD12Q6NUT3 480 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 IFT20Q8IY31 132 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 FAM216AQ8WUB2 273 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 HSD17B8Q92506 261 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 NXNL1Q96CM4 212 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 FOXN4Q96NZ1 517 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 SERPINB12Q96P63 405 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 HBEGFQ99075 208 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 PELOQ9BRX2 385 aaKnown RBP13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 LRRC1Q9BTT6 524 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 CBLN4Q9NTU7 201 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 FBXO34Q9NWN3 711 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 PLCE1Q9P212 2302 aa13.67□□□□□ -0.22
CLSTN3-216ENST00000545663 A0A0A6YYJ9 748 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 SLCO1B7G3V0H7 640 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 H3BML4 177 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 SLU7O95391 586 aaKnown RBP13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 TTC4O95801 387 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 SLC35E2BP0CK96 405 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 SLC35E2P0CK97 266 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 COL6A2P12110 1019 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 S1PR1P21453 382 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 EFNA4P52798 201 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 PLCXD2Q0VAA5 305 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 SGCBQ16585 318 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 FBXO48Q5FWF7 155 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 RAET1LQ5VY80 246 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 PEG10Q86TG7 708 aaKnown RBP13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 RNF175Q8N4F7 328 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 LRRC17Q8N6Y2 441 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 C17orf47Q8NEP4 570 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 GMPPAQ96IJ6 420 aaPredicted RBP13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 EGFL8Q99944 293 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 PRRG4Q9BZD6 226 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 TRIM31Q9BZY9 425 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 METTL17Q9H7H0 456 aaPredicted RBP13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 FANCFQ9NPI8 374 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 SNX24Q9Y343 169 aa13.66□□□□□ -0.22
CLSTN3-216ENST00000545663 A0A1W2PR48 441 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 ESYT3A0FGR9 886 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 LRP5LA4QPB2 252 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 NPEPPSL1A6NEC2 478 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 H7C417 338 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 ABCD4O14678 606 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 CLGNO14967 610 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 EEDO75530 441 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 TUBBP07437 444 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 EPB42P16452 691 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 HK1P19367 917 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 IL32P24001 234 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 GRK2P25098 689 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 GALNSP34059 522 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 MAGEA3P43357 314 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 LGALS3BPQ08380 585 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 PDAP1Q13442 181 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 P2RY6Q15077 328 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 SFRP5Q5T4F7 317 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 DEPDC1Q5TB30 811 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 OR4C11Q6IEV9 310 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 RINLQ6ZS11 566 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 GALNT12Q8IXK2 581 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 GABRG1Q8N1C3 465 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 AGGF1Q8N302 714 aaeCLIP13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 EIF1ADQ8N9N8 165 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 NOA1Q8NC60 698 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 SRFBP1Q8NEF9 429 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 ZNF473Q8WTR7 871 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 ZNF747Q9BV97 191 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 HDHD5Q9BXW7 423 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 ITPAQ9BY32 194 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 OR51B5Q9H339 312 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 PRM3Q9NNZ6 103 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 MS4A12Q9NXJ0 267 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 XPR1Q9UBH6 696 aa13.65□□□□□ -0.22
CLSTN3-216ENST00000545663 OR2M5A3KFT3 312 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 PGRMC2O15173 223 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 CSF3P09919 207 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 FCGR2AP12318 317 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 TLX1P31314 330 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 IL2RGP31785 369 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 BUD31P41223 144 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 DSCR4P56555 118 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 GUCY2DQ02846 1103 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 IQCCQ4KMZ1 466 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 ANKRD22Q5VYY1 191 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 STK32CQ86UX6 486 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 MUC15Q8N387 334 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 METTL25Q8N6Q8 603 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 ANKRD7Q92527 254 aa13.64□□□□□ -0.23
CLSTN3-216ENST00000545663 ESAMQ96AP7 390 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms