RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 OR4K14Q8NGD5 310 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 OR13F1Q8NGS4 319 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 ADAMTS18Q8TE60 1221 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 DOK4Q8TEW6 326 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 IPCEF1Q8WWN9 437 aaPredicted RBP6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 RASSF5Q8WWW0 418 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 PCSK5Q92824 1860 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 HOXB13Q92826 284 aaPredicted RBP6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 TANKQ92844 425 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 TSLPQ969D9 159 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 TMIGD2Q96BF3 282 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 ELP4Q96EB1 424 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 NEURL3Q96EH8 262 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 LRFN5Q96NI6 719 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 OR1F2PQ96R84 312 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 MBOAT4Q96T53 435 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 SLC35A5Q9BS91 424 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 NDC1Q9BTX1 674 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 AMBRA1Q9C0C7 1298 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 TGIF2Q9GZN2 237 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 RUBCNLQ9H714 662 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 GPN2Q9H9Y4 310 aaPredicted RBP6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 SMURF2Q9HAU4 748 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 FANCEQ9HB96 536 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 ZNF304Q9HCX3 659 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 NEUROD4Q9HD90 331 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 MAT2BQ9NZL9 334 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 SAMHD1Q9Y3Z3 626 aaKnown RBP6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 PCDHGA8Q9Y5G5 932 aa6.53□□□□□ -1.36
HMGCS2-204ENST00000544913 FRYQ5TBA9 3013 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 MEN1O00255 615 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PDE9AO76083 593 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ZIC2O95409 532 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CLIC3O95833 236 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 DLGAP3O95886 979 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CBX7O95931 251 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 IFI6P09912 130 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CCNA2P20248 432 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 FBLP22087 321 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ALAS2P22557 587 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 NTSP30990 170 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 MAP3K8P41279 467 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 MANFP55145 182 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CASP9P55211 416 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 HSD17B7P56937 341 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CDK5R2Q13319 367 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PMS2P3Q13401 168 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 IFI44LQ53G44 452 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 TRMT12Q53H54 448 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 FAM69BQ5VUD6 431 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 TMEM107Q6UX40 140 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 BPHLQ86WA6 291 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 RNF130Q86XS8 419 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ARMC8Q8IUR7 673 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ZNF595Q8IYB9 648 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ZSCAN1Q8NBB4 408 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CHDHQ8NE62 594 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ZNF675Q8TD23 568 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 KAT2AQ92830 837 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 C12orf43Q96C57 262 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 HSH2DQ96JZ2 352 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 DCBLD2Q96PD2 775 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 NODALQ96S42 347 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 SPSB2Q99619 263 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 VN1R1Q9GZP7 353 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 SLC26A1Q9H2B4 701 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PLGRKTQ9HBL7 147 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 THSD1Q9NS62 852 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 KRT84Q9NSB2 600 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 IRAK4Q9NWZ3 460 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PDP1Q9P0J1 537 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 FOXJ2Q9P0K8 574 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 KIF17Q9P2E2 1029 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 TRPC4Q9UBN4 977 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 TMEFF2Q9UIK5 374 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ANGPT4Q9Y264 503 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PCDHGA3Q9Y5H0 932 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CFAP47Q6ZTR5 3102 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 TCRBV16S1A1N1A0A5B0 115 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 TMEM247A6NEH6 219 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 SLC1A7O00341 560 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 TERTO14746 1132 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 POLR1CO15160 346 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PLOD3O60568 738 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CPNE3O75131 537 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ANGPTL1O95841 491 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 SLC35E2P0CK97 266 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ETFAP13804 333 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 PORP16435 677 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ELK4P28324 431 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 TLX1P31314 330 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CHI3L1P36222 383 aaPredicted RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CRATP43155 626 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 STT3AP46977 705 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 ANXA11P50995 505 aaKnown RBP6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 SKP1P63208 163 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 KCNJ10P78508 379 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 IL5RAQ01344 420 aa6.52□□□□□ -1.37
HMGCS2-204ENST00000544913 CD47Q08722 323 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms