RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 ZNF337Q9Y3M9 751 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 RNF115Q9Y4L5 304 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 PCDHA9Q9Y5H5 950 aa13.1□□□□□ -0.31
COPS7A-220ENST00000544725 SYCE1LA8MT33 242 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 H3BML4 177 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 TSPAN2O60636 221 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 ADAM11O75078 769 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 BCAS2O75934 225 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-220ENST00000544725 PLGP00747 810 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-220ENST00000544725 SOD3P08294 240 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 DANCRP0C864 163 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 PCSK2P16519 638 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 CDKN1AP38936 164 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 GP5P40197 560 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 MAPK12P53778 367 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 GAS1P54826 345 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 CTBP2P56545 445 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 MRPS22P82650 360 aaKnown RBP13.09□□□□□ -0.31
COPS7A-220ENST00000544725 SGCBQ16585 318 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 C6orf52Q5T4I8 152 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 DNM1P46Q6ZS02 220 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 BEND4Q6ZU67 534 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 TBC1D1Q86TI0 1168 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-220ENST00000544725 METTL25Q8N6Q8 603 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 FADS6Q8N9I5 356 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 L3MBTL4Q8NA19 623 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 SMAP2Q8WU79 429 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-220ENST00000544725 HS6ST2Q96MM7 605 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 BTBD9Q96Q07 612 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 OSBPL9Q96SU4 736 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 PRRG4Q9BZD6 226 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 DSN1Q9H410 356 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 BARX1Q9HBU1 254 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-220ENST00000544725 LIPT1Q9Y234 373 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 GPR52Q9Y2T5 361 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 RNF11Q9Y3C5 154 aa13.09□□□□□ -0.31
COPS7A-220ENST00000544725 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.08□□□□□ -0.316e-24■■■■■ 88.5
COPS7A-220ENST00000544725 A0A1W2PP18 115 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 OR2M5A3KFT3 312 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 CXorf49A8MYA2 514 aaPredicted RBP13.08□□□□□ -0.32
COPS7A-220ENST00000544725 B4DXG7 233 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 E7ESA3 106 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 CLOCKO15516 846 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 AQP8O94778 261 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 IGHV4-39P01824 125 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 LTA4HP09960 611 aaKnown RBP13.08□□□□□ -0.32
COPS7A-220ENST00000544725 MTHFD2P13995 350 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 GFAPP14136 432 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 IL11P20809 199 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 PIK3CGP48736 1102 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 PNLIPRP2P54317 469 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 CLDN20P56880 219 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 DLG1Q12959 904 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 PPP4R4Q6NUP7 873 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 STK32CQ86UX6 486 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 ZBED8Q8IZ13 594 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 OR2M3Q8NG83 312 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 LILRB1Q8NHL6 650 aaPredicted RBP13.08□□□□□ -0.32
COPS7A-220ENST00000544725 RAB3IL1Q8TBN0 382 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 TRPC4APQ8TEL6 797 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 KLHL29Q96CT2 875 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 GMPPAQ96IJ6 420 aaPredicted RBP13.08□□□□□ -0.32
COPS7A-220ENST00000544725 BEX2Q9BXY8 128 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 PTGES2Q9H7Z7 377 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 IPPKQ9H8X2 491 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 WHRNQ9P202 907 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 ACOT9Q9Y305 439 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 MAGED1Q9Y5V3 778 aaPredicted RBP13.08□□□□□ -0.32
COPS7A-220ENST00000544725 AP4B1Q9Y6B7 739 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 ZNF780BQ9Y6R6 833 aa13.08□□□□□ -0.32
COPS7A-220ENST00000544725 SCO2O43819 266 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
COPS7A-220ENST00000544725 SEC31AO94979 1220 aaKnown RBP13.07□□□□□ -0.32
COPS7A-220ENST00000544725 CLDN9O95484 217 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 FESP07332 822 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 CD3EP07766 207 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 CT45A8P0DMV1 189 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 CT45A9P0DMV2 189 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 PSMB1P20618 241 aaKnown RBP13.07□□□□□ -0.32
COPS7A-220ENST00000544725 SPRP35270 261 aaPredicted RBP13.07□□□□□ -0.32
COPS7A-220ENST00000544725 MRPS35P82673 323 aaKnown RBP13.07□□□□□ -0.32
COPS7A-220ENST00000544725 GTF2H2Q13888 395 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 LTB4RQ15722 352 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 PFKFB4Q16877 469 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 CT45A2Q5DJT8 189 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 ALKBH2Q6NS38 261 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 GTF2H2CQ6P1K8 395 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 GOLGA7Q7Z5G4 137 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 STEAP2Q8NFT2 490 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 RHEBL1Q8TAI7 183 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 KCNK17Q96T54 332 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 RHNO1Q9BSD3 238 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 NTMT1Q9BV86 223 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 C19orf24Q9BVV8 132 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 MRPL1Q9BYD6 325 aaKnown RBP13.07□□□□□ -0.32
COPS7A-220ENST00000544725 ESRP2Q9H6T0 727 aaKnown RBP13.07□□□□□ -0.32
COPS7A-220ENST00000544725 LRTM1Q9HBL6 345 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 ZBTB26Q9HCK0 441 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 NGBQ9NPG2 151 aa13.07□□□□□ -0.32
COPS7A-220ENST00000544725 SDHAF3Q9NRP4 125 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms