RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PTPMT1Q8WUK0 201 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 STON2Q8WXE9 905 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 RHBDF1Q96CC6 855 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 IQCDQ96DY2 449 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 C11orf24Q96F05 449 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 TMEM41AQ96HV5 264 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 RUNDC3BQ96NL0 473 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 KLHL4Q9C0H6 718 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 NELFAQ9H3P2 528 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 PROK2Q9HC23 129 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 LMBRD1Q9NUN5 540 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 PNPOQ9NVS9 261 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 ZNHIT6Q9NWK9 470 aaKnown RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 MOCS1Q9NZB8 636 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 ARMCX1Q9P291 453 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 CNOT11Q9UKZ1 510 aaKnown RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 OAZ3Q9UMX2 235 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 PROCRQ9UNN8 238 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 R3HDM2Q9Y2K5 976 aaKnown RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 MAGED1Q9Y5V3 778 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 WIF1Q9Y5W5 379 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 IQANK1A0A1B0GTG1 560 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 UBE2QL1A1L167 161 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SLC22A20A6NK97 555 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 BTNL10A8MVZ5 291 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 H3BUI4 141 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PLOD2O00469 737 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 CLOCKO15516 846 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 HOXA3O43365 443 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 HCRTR2O43614 444 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF354AO60765 605 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 TRIM13O60858 407 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PEX14O75381 377 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PLAUP00749 431 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SERPINA6P08185 405 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 RHOXF2BP0C7M4 288 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SMIM10L1P0DMW3 83 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PCMT1P22061 227 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 GSTM2P28161 218 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PTPN6P29350 595 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PPP2R1BP30154 601 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 FMO4P31512 558 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SRP14P37108 136 aaKnown RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 CETN2P41208 172 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 HNF4AP41235 474 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 NAGLUP54802 743 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 EEFSECP57772 596 aaKnown RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 EIF3EP60228 445 aaKnown RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 BTN3A2P78410 334 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SRYQ05066 204 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 FUT7Q11130 342 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 KCNJ11Q14654 390 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 RAB35Q15286 201 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 BCL2A1Q16548 175 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SLC18A3Q16572 532 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF672Q499Z4 452 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 EIPR1Q53HC9 387 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 CTSL3PQ5NE16 218 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 AGAP6Q5VW22 663 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 VWA1Q6PCB0 445 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PPP1R21Q6ZMI0 780 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 IL17RELQ6ZVW7 336 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 APTXQ7Z2E3 356 aaKnown RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 CLNKQ7Z7G1 428 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 DTX2Q86UW9 622 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 IFNEQ86WN2 208 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 FAM90A1Q86YD7 464 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PALM2Q8IXS6 379 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 KATNAL2Q8IYT4 538 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 OTUD6BQ8N6M0 293 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SYT8Q8NBV8 401 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 FAM83FQ8NEG4 500 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 TTLQ8NG68 377 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 OR4K1Q8NGD4 311 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 OR14L1PQ8NHC6 308 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 ACTL9Q8TC94 416 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SPPL2AQ8TCT8 520 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF721Q8TF20 911 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 ATL1Q8WXF7 558 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 ANKRD7Q92527 254 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 KAT2AQ92830 837 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PMM1Q92871 262 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SLC35A4Q96G79 324 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SMIM10Q96HG1 83 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 RILPQ96NA2 401 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 BIRC8Q96P09 236 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 GNRHR2Q96P88 292 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 TRAF4Q9BUZ4 470 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 RBM4Q9BWF3 364 aaKnown RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 ALOXE3Q9BYJ1 711 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 MEGF9Q9H1U4 602 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 OPN3Q9H1Y3 402 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 CCDC68Q9H2F9 335 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 C10orf88Q9H8K7 445 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 ACTR8Q9H981 624 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SNX15Q9NRS6 342 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 PIH1D1Q9NWS0 290 aaKnown RBP3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SLC2A6Q9UGQ3 507 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 SLC23A1Q9UHI7 598 aa3.66□□□□□ -1.82
SNHG1-220ENST00000544550 AMFRQ9UKV5 643 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms