RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 SGO1Q5FBB7 561 aa17.99■□□□□ 0.47
LPCAT3-211ENST00000543794 UBQLNLQ8IYU4 475 aa17.99■□□□□ 0.47
LPCAT3-211ENST00000543794 MEIOBQ8N635 442 aa17.99■□□□□ 0.47
LPCAT3-211ENST00000543794 ZNF610Q8N9Z0 462 aa17.99■□□□□ 0.47
LPCAT3-211ENST00000543794 ZNF675Q8TD23 568 aa17.99■□□□□ 0.47
LPCAT3-211ENST00000543794 CAVIN3Q969G5 261 aa17.99■□□□□ 0.47
LPCAT3-211ENST00000543794 RNF122Q9H9V4 155 aa17.99■□□□□ 0.47
LPCAT3-211ENST00000543794 ZNF701Q9NV72 531 aaPredicted RBP17.99■□□□□ 0.47
LPCAT3-211ENST00000543794 SLC12A4Q9UP95 1085 aa17.99■□□□□ 0.47
LPCAT3-211ENST00000543794 CRLF1O75462 422 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 TBXA2RP21731 343 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 KCNJ5P48544 419 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 PNLIPRP2P54317 469 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 CORO7P57737 925 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 GNG11P61952 73 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 TRA2BP62995 288 aaKnown RBP17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 SIRPAP78324 504 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 PSPHP78330 225 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 GGTA1PQ4G0N0 100 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 ZNF628Q5EBL2 1059 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 TECRLQ5HYJ1 363 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 LARP4Q71RC2 724 aaKnown RBP eCLIP17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 FADS6Q8N9I5 356 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 OR4K17Q8NGC6 315 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 ERP27Q96DN0 273 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 PHF21BQ96EK2 531 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 VSTM2LQ96N03 204 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 NSUN5Q96P11 429 aaKnown RBP17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 NAPGQ99747 312 aaPredicted RBP17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 FAIM2Q9BWQ8 316 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 ELOVL6Q9H5J4 265 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 ANKRA2Q9H9E1 313 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 FARSBQ9NSD9 589 aaKnown RBP17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 PCTPQ9UKL6 214 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 USF3Q68DE3 2245 aa17.98■□□□□ 0.47
LPCAT3-211ENST00000543794 STAB1Q9NY15 2570 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 C17orf51A8MQB3 221 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 H0YC42 278 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 STX16-NPEPL1H3BU86 382 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 STX16O14662 325 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 NME6O75414 186 aaPredicted RBP17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 KRT20P35900 424 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 PLTPP55058 493 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 TPD52P55327 224 aaPredicted RBP17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 GUCY2DQ02846 1103 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 CAPRIN1Q14444 709 aaKnown RBP17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 GUSBP1Q15486 140 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 ANKRD34AQ69YU3 496 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 NPSR1Q6W5P4 371 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 SH2D5Q6ZV89 423 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 MILR1Q7Z6M3 343 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 CCDC116Q8IYX3 515 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 OR4F6Q8NGB9 312 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 DSN1Q9H410 356 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 BRF2Q9HAW0 419 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 UTS2RQ9UKP6 389 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 ZNF337Q9Y3M9 751 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 ZNF175Q9Y473 711 aa17.97■□□□□ 0.47
LPCAT3-211ENST00000543794 RAI1Q7Z5J4 1906 aaPredicted RBP17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 LINC01387J3KSC0 135 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 KLF4O43474 513 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 RAD51CO43502 376 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 TMCC2O75069 709 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 PDYNP01213 254 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 ALDOAP04075 364 aaKnown RBP17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 THBDP07204 575 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 IL12BP29460 328 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 TYK2P29597 1187 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 ALDH9A1P49189 494 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 OCRLQ01968 901 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 CCDC25Q86WR0 208 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 PLD6Q8N2A8 252 aaKnown RBP17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 OR2M3Q8NG83 312 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 FNDC9Q8TBE3 224 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 TMEM171Q8WVE6 324 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 PINK1Q9BXM7 581 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 KLHL4Q9C0H6 718 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 TMCO1Q9UM00 188 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 PROCRQ9UNN8 238 aa17.96■□□□□ 0.47
LPCAT3-211ENST00000543794 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 HK1P19367 917 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 MRPS22P82650 360 aaKnown RBP17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 CAV1Q03135 178 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 KRTAP1-1Q07627 177 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 BEX5Q5H9J7 111 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 RAET1LQ5VY80 246 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 FAM214BQ7L5A3 538 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 OR4N2Q8NGD1 307 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 FBXO25Q8TCJ0 367 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 SELENOMQ8WWX9 145 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 KAT2AQ92830 837 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 EFHD2Q96C19 240 aaPredicted RBP17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 MRRFQ96E11 262 aaKnown RBP17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 CXorf56Q9H5V9 222 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 FOLH1BQ9HBA9 442 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 NMRK1Q9NWW6 199 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 PPP4R1LQ9P1A2 415 aa17.95■□□□□ 0.46
LPCAT3-211ENST00000543794 SOX30O94993 753 aa17.94■□□□□ 0.46
LPCAT3-211ENST00000543794 RBP1P09455 135 aa17.94■□□□□ 0.46
LPCAT3-211ENST00000543794 CTAGE8P0CG41 777 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms