RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 CLECL1Q8IZS7 167 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 MIER2Q8N344 545 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 OR4N2Q8NGD1 307 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 MARK4Q96L34 752 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 ZNF597Q96LX8 424 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 CCDC115Q96NT0 180 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 STACQ99469 402 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 DOHHQ9BU89 302 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 ZDHHC11Q9H8X9 412 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 DUSP22Q9NRW4 184 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 GPATCH2Q9NW75 528 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 TUBA8Q9NY65 449 aaPredicted RBP16.87■□□□□ 0.29
COPS7A-216ENST00000543170 SEC14L3Q9UDX4 400 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 PCDHGB4Q9UN71 923 aa16.87■□□□□ 0.29
COPS7A-216ENST00000543170 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.87■□□□□ 0.29
COPS7A-216ENST00000543170 GCN1Q92616 2671 aaKnown RBP16.87■□□□□ 0.29
COPS7A-216ENST00000543170 NINQ8N4C6 2090 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 TRIM3O75382 744 aaPredicted RBP16.86■□□□□ 0.29
COPS7A-216ENST00000543170 KCNH1O95259 989 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 HMGN2P05204 90 aaKnown RBP16.86■□□□□ 0.29
COPS7A-216ENST00000543170 ACP2P11117 423 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 ATP4BP51164 291 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 PLGLB1Q02325 96 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 GAB1Q13480 694 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 SPDYE7PQ495Y7 208 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 SLC30A6Q6NXT4 461 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 CDC73Q6P1J9 531 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 GHDCQ8N2G8 530 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 FAM109AQ8N4B1 249 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 OR4A15Q8NGL6 344 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 GOT1L1Q8NHS2 421 aaPredicted RBP16.86■□□□□ 0.29
COPS7A-216ENST00000543170 TMEM41AQ96HV5 264 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 RILPQ96NA2 401 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 NODALQ96S42 347 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 ADOQ96SZ5 270 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 OSBPL11Q9BXB4 747 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 ZNF703Q9H7S9 590 aaPredicted RBP16.86■□□□□ 0.29
COPS7A-216ENST00000543170 METTL7AQ9H8H3 244 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 ZFP64Q9NPA5 681 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 PLSCR2Q9NRY7 297 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 TMEM45AQ9NWC5 275 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 QPCTLQ9NXS2 382 aa16.86■□□□□ 0.29
COPS7A-216ENST00000543170 PRAMEF25A6NGN4 478 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 LRRC3CA6NJW4 275 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 NPIPA5E9PKD4 350 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 HS6ST1O60243 411 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 IL33O95760 270 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 ALOX5P09917 674 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 GABRA3P34903 492 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 SOAT1P35610 550 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 RFC3P40938 356 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 PTGDSP41222 190 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 ZFP36L2P47974 494 aaKnown RBP16.85■□□□□ 0.29
COPS7A-216ENST00000543170 PPIAP62937 165 aaKnown RBP16.85■□□□□ 0.29
COPS7A-216ENST00000543170 KCNC4Q03721 635 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 TP53BP2Q13625 1128 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 LASP1Q14847 261 aaKnown RBP16.85■□□□□ 0.29
COPS7A-216ENST00000543170 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.85■□□□□ 0.29
COPS7A-216ENST00000543170 GFRALQ6UXV0 394 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 WDR53Q7Z5U6 358 aaPredicted RBP16.85■□□□□ 0.29
COPS7A-216ENST00000543170 ANKRD46Q86W74 232 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 SLC16A11Q8NCK7 471 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 GPR151Q8TDV0 419 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 SLC9A6Q92581 669 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 EFHD2Q96C19 240 aaPredicted RBP16.85■□□□□ 0.29
COPS7A-216ENST00000543170 ACTRT3Q9BYD9 372 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 PIGUQ9H490 435 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 NPHS2Q9NP85 383 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 NPIPA1Q9UND3 350 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 ABCG2Q9UNQ0 655 aa16.85■□□□□ 0.29
COPS7A-216ENST00000543170 HIVEP3Q5T1R4 2406 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 RNF103-CHMP3A0A140T963 221 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 FAM234BA2RU67 622 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 ASNA1O43681 348 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 UNC5CO95185 931 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 UQCRC2P22695 453 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 ELAVL4P26378 380 aaKnown RBP16.84■□□□□ 0.29
COPS7A-216ENST00000543170 LCN1P31025 176 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 MDH1P40925 334 aaKnown RBP16.84■□□□□ 0.29
COPS7A-216ENST00000543170 DGKQP52824 942 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 GUCY1A3Q02108 690 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 RBPJQ06330 500 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 DUSP5Q16690 384 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.84■□□□□ 0.29
COPS7A-216ENST00000543170 CMPK2Q5EBM0 449 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 BICRALQ6AI39 1079 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 PACS2Q86VP3 889 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 TMEM251Q8N6I4 163 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 OR5AK3PQ8NH89 298 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 FAM110BQ8TC76 370 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 OR52E6Q96RD3 313 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 TSPAN10Q9H1Z9 355 aaPredicted RBP16.84■□□□□ 0.29
COPS7A-216ENST00000543170 KLRF1Q9NZS2 232 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 B4GALT7Q9UBV7 327 aa16.84■□□□□ 0.29
COPS7A-216ENST00000543170 FAF1Q9UNN5 650 aaPredicted RBP16.84■□□□□ 0.29
COPS7A-216ENST00000543170 GXYLT2A0PJZ3 443 aa16.83■□□□□ 0.28
COPS7A-216ENST00000543170 FAM166BA8MTA8 275 aa16.83■□□□□ 0.28
COPS7A-216ENST00000543170 C9JVG2 144 aa16.83■□□□□ 0.28
COPS7A-216ENST00000543170 SNPHO15079 494 aa16.83■□□□□ 0.28
COPS7A-216ENST00000543170 IGHG3P01860 377 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms