RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 PKP4Q99569 1192 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 SLC6A17Q9H1V8 727 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 SLC6A15Q9H2J7 730 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 SUV39H2Q9H5I1 410 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 PCDHB16Q9NRJ7 776 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 COPS3Q9UNS2 423 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 ZNF98A6NK75 572 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 CTSLP07711 333 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 HOXB1P14653 301 aaPredicted RBP16.03■□□□□ 0.16
NELFA-216ENST00000542778 AHCYP23526 432 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 SMSP52788 366 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 LIM2P55344 173 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 GPR68Q15743 365 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 FAM78AQ5JUQ0 283 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 ANXA8L1Q5VT79 327 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 MARCH9Q86YJ5 346 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 FTMTQ8N4E7 242 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 ARIH2OSQ8N7S6 290 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 NEIL3Q8TAT5 605 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 NXPE3Q969Y0 559 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 ATG2BQ96BY7 2078 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 ERMAPQ96PL5 475 aaPredicted RBP16.03■□□□□ 0.16
NELFA-216ENST00000542778 NKX2-4Q9H2Z4 354 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 ENAMQ9NRM1 1142 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 IMP3Q9NV31 184 aaKnown RBP16.03■□□□□ 0.16
NELFA-216ENST00000542778 TCF20Q9UGU0 1960 aaKnown RBP16.03■□□□□ 0.16
NELFA-216ENST00000542778 SLC25A13Q9UJS0 675 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 PLXNB3Q9ULL4 1909 aa16.03■□□□□ 0.16
NELFA-216ENST00000542778 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.02■□□□□ 0.16
NELFA-216ENST00000542778 LINC01565O15544 149 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 MMP20O60882 483 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 PTP4A3O75365 173 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 TCRBP04435 133 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 RB1P06400 928 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 CHI3L1P36222 383 aaPredicted RBP16.02■□□□□ 0.16
NELFA-216ENST00000542778 ERVK-21P61565 698 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 CDK6Q00534 326 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 LINC00469Q8N7U9 141 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 WDR48Q8TAF3 677 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 CXorf58Q96LI9 332 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 ZNF582Q96NG8 517 aaPredicted RBP16.02■□□□□ 0.16
NELFA-216ENST00000542778 DPYSL5Q9BPU6 564 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 MTIF3Q9H2K0 278 aaKnown RBP16.02■□□□□ 0.16
NELFA-216ENST00000542778 BRD7Q9NPI1 651 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 MED9Q9NWA0 146 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 MGAT4BQ9UQ53 548 aa16.02■□□□□ 0.16
NELFA-216ENST00000542778 RUVBL1Q9Y265 456 aaKnown RBP16.02■□□□□ 0.16
NELFA-216ENST00000542778 USP34Q70CQ2 3546 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 A8MXK9 166 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 SH3BP5O60239 455 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 IDSP22304 550 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 SOX18P35713 384 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 CD79BP40259 229 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 NFATC2Q13469 925 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 ST3GAL2Q16842 350 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 HSD17B12Q53GQ0 312 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 XKR6Q5GH73 641 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 RGS7BPQ6MZT1 257 aaPredicted RBP16.02■□□□□ 0.15
NELFA-216ENST00000542778 ECHDC3Q96DC8 303 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 LRR1Q96L50 414 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 POLDIP3Q9BY77 421 aaKnown RBP16.02■□□□□ 0.15
NELFA-216ENST00000542778 POLR2J3Q9H1A7 115 aaKnown RBP16.02■□□□□ 0.15
NELFA-216ENST00000542778 TMEM38AQ9H6F2 299 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 ZNF624Q9P2J8 865 aaPredicted RBP16.02■□□□□ 0.15
NELFA-216ENST00000542778 VPS29Q9UBQ0 182 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 POMT2Q9UKY4 750 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 LIPT1Q9Y234 373 aa16.02■□□□□ 0.15
NELFA-216ENST00000542778 TNRC18O15417 2968 aaPredicted RBP16.02■□□□□ 0.15
NELFA-216ENST00000542778 EEF1E1O43324 174 aaKnown RBP16.01■□□□□ 0.15
NELFA-216ENST00000542778 OR10H3O60404 316 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 SOCS5O75159 536 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 LEFTY1O75610 366 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 TOXO94900 526 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 IFNA14P01570 189 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 ITPKAP23677 461 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 AOAHP28039 575 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 CSNK1DP48730 415 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 SRP9P49458 86 aaKnown RBP16.01■□□□□ 0.15
NELFA-216ENST00000542778 CAMKMTQ7Z624 323 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 UXS1Q8NBZ7 420 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 OR52N2Q8NGI0 321 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 OR2T35Q8NGX2 323 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 FERD3LQ96RJ6 166 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 PELOQ9BRX2 385 aaKnown RBP16.01■□□□□ 0.15
NELFA-216ENST00000542778 TMED9Q9BVK6 235 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 TMEM168Q9H0V1 697 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 C1GALT1Q9NS00 363 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 B4GALT6Q9UBX8 382 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 ZNF106Q9H2Y7 1883 aaKnown RBP16.01■□□□□ 0.15
NELFA-216ENST00000542778 KIF26AQ9ULI4 1882 aaPredicted RBP16.01■□□□□ 0.15
NELFA-216ENST00000542778 PRRT4C9JH25 899 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 GAAP10253 952 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 LCN1P31025 176 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 MMP12P39900 470 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 OPRD1P41143 372 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 PCBP3P57721 371 aaKnown RBP16.01■□□□□ 0.15
NELFA-216ENST00000542778 ZP1P60852 638 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 ACSM2AQ08AH3 577 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 COX10Q12887 443 aa16.01■□□□□ 0.15
NELFA-216ENST00000542778 GNA13Q14344 377 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms